CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-007139
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Uncharacterized deoxyribonuclease YjjV 
Protein Synonyms/Alias
  
Gene Name
 yjjV 
Gene Synonyms/Alias
 b4378; JW4341 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
35AAQAGVGKIIVPATEacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Putative deoxyribonuclease (By similarity). 
Sequence Annotation
 METAL 9 9 Divalent metal cation 1.
 METAL 11 11 Divalent metal cation 1.
 METAL 97 97 Divalent metal cation 1.
 METAL 97 97 Divalent metal cation 2.
 METAL 133 133 Divalent metal cation 2.
 METAL 157 157 Divalent metal cation 2.
 METAL 207 207 Divalent metal cation 1.  
Keyword
 3D-structure; Complete proteome; Hydrolase; Metal-binding; Nuclease; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 259 AA 
Protein Sequence
MICRFIDTHC HFDFPPFSGD EEASLQRAAQ AGVGKIIVPA TEAENFARVL ALAENYQPLY 60
AALGLHPGML EKHSDVSLEQ LQQALERRPA KVVAVGEIGL DLFGDDPQFE RQQWLLDEQL 120
KLAKRYDLPV ILHSRRTHDK LAMHLKRHDL PRTGVVHGFS GSLQQAERFV QLGYKIGVGG 180
TITYPRASKT RDVIAKLPLA SLLLETDAPD MPLNGFQGQP NRPEQAARVF AVLCELRREP 240
ADEIAQALLN NTYTLFNVP 259 
Gene Ontology
 GO:0016888; F:endodeoxyribonuclease activity, producing 5'-phosphomonoesters; IEA:InterPro.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0090305; P:nucleic acid phosphodiester bond hydrolysis; IEA:GOC. 
Interpro
 IPR018228; DNase_TatD-rel_CS.
 IPR001130; TatD_family. 
Pfam
 PF01026; TatD_DNase 
SMART
  
PROSITE
 PS01137; TATD_1
 PS01090; TATD_2
 PS01091; TATD_3 
PRINTS