CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-026418
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein Tom1 
Protein Synonyms/Alias
 Target of myb1 homolog (Chicken) 
Gene Name
 Tom1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
385ADQRKGVKYEAPQTTubiquitination[1]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 492 AA 
Protein Sequence
MDFLLGNPFS SPVGQRIEKA TDGSLQSEDW ALNMEICDII NETEEGPKDA FRAVKKRIVG 60
NKNFHEVMLA LTVLETCVKN CGHRFHVLVA SQDFVENVLV RTILPKNNPP TIVHDKVLNL 120
IQSWADAFRS SPDLTGVVAV YEDLRRKGLE FPMTDLDMLS PIHTPQRTVF NSETPSRQNP 180
VVSNSSHRGD LSQHATPLPT PAVLPGDSPI TPTPEQIGKL RSELEMVNGN VRVMSEMLTE 240
LVPTQVEPAD LELLQELNRT CRAMQQRILE LIPRISNEQL TEELLMINDN LNNVFLRHER 300
FERFRTGQTA KASGEAELAA DLIDMGPDPA ATSNLSSQLA GVDLGSSRVR AGLQSLEASG 360
HLEDDFDMFA LTRGSSLADQ RKGVKYEAPQ TTDGLAGALD ARQQSTGAIP ATQARIMEDI 420
EQWLSTDVGS SAEEPSGVTS EEFDKFLEER AKAADRLPNL ASPSAEGPPR PCPGAAPRRK 480
TQEKDDDVLF AL 492 
Gene Ontology
 GO:0005829; C:cytosol; IEA:Compara.
 GO:0005769; C:early endosome; IEA:Compara.
 GO:0016020; C:membrane; IEA:Compara.
 GO:0006886; P:intracellular protein transport; IEA:InterPro. 
Interpro
 IPR008942; ENTH_VHS.
 IPR004152; GAT.
 IPR014645; TOM1.
 IPR002014; VHS.
 IPR018205; VHS_subgr. 
Pfam
 PF03127; GAT
 PF00790; VHS 
SMART
 SM00288; VHS 
PROSITE
 PS50909; GAT
 PS50179; VHS 
PRINTS