CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-019498
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Retinol dehydrogenase 12 
Protein Synonyms/Alias
 All-trans and 9-cis retinol dehydrogenase 
Gene Name
 RDH12 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
103KLDLSDTKSIRAFAEubiquitination[1]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments. 
Sequence Annotation
 NP_BIND 46 52 NADP (By similarity).
 ACT_SITE 200 200 Proton acceptor (By similarity).
 BINDING 175 175 Substrate (By similarity).  
Keyword
 Complete proteome; Disease mutation; Leber congenital amaurosis; NADP; Oxidoreductase; Polymorphism; Reference proteome; Retinitis pigmentosa; Sensory transduction; Vision. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 316 AA 
Protein Sequence
MLVTLGLLTS FFSFLYMVAP SIRKFFAGGV CRTNVQLPGK VVVITGANTG IGKETARELA 60
SRGARVYIAC RDVLKGESAA SEIRVDTKNS QVLVRKLDLS DTKSIRAFAE GFLAEEKQLH 120
ILINNAGVMM CPYSKTADGF ETHLGVNHLG HFLLTYLLLE RLKVSAPARV VNVSSVAHHI 180
GKIPFHDLQS EKRYSRGFAY CHSKLANVLF TRELAKRLQG TGVTTYAVHP GVVRSELVRH 240
SSLLCLLWRL FSPFVKTARE GAQTSLHCAL AEGLEPLSGK YFSDCKRTWV SPRARNNKTA 300
ERLWNVSCEL LGIRWE 316 
Gene Ontology
 GO:0005622; C:intracellular; IDA:UniProtKB.
 GO:0060342; C:photoreceptor inner segment membrane; TAS:Reactome.
 GO:0004745; F:retinol dehydrogenase activity; IDA:UniProtKB.
 GO:0045494; P:photoreceptor cell maintenance; TAS:UniProtKB.
 GO:0007603; P:phototransduction, visible light; TAS:Reactome.
 GO:0042572; P:retinol metabolic process; IDA:UniProtKB. 
Interpro
 IPR002198; DH_sc/Rdtase_SDR.
 IPR002347; Glc/ribitol_DH.
 IPR016040; NAD(P)-bd_dom. 
Pfam
 PF00106; adh_short 
SMART
  
PROSITE
 PS00061; ADH_SHORT 
PRINTS
 PR00081; GDHRDH.
 PR00080; SDRFAMILY.