CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-014334
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Visual system homeobox 2 
Protein Synonyms/Alias
 Ceh-10 homeodomain-containing homolog; Homeobox protein CHX10 
Gene Name
 Vsx2 
Gene Synonyms/Alias
 Chx10 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
11KAGEALSKPKSETVAacetylation[1]
Reference
 [1] Substrate and functional diversity of lysine acetylation revealed by a proteomics survey.
 Kim SC, Sprung R, Chen Y, Xu Y, Ball H, Pei J, Cheng T, Kho Y, Xiao H, Xiao L, Grishin NV, White M, Yang XJ, Zhao Y.
 Mol Cell. 2006 Aug;23(4):607-18. [PMID: 16916647
Functional Description
 Plays a significant role in the specification and morphogenesis of the sensory retina. May also participate in the development of the cells of the inner nuclear layer, particularly bipolar cells. 
Sequence Annotation
 DOMAIN 208 261 CVC.
 DNA_BIND 148 207 Homeobox.
 MOTIF 304 317 OAR.
 MOD_RES 11 11 N6-acetyllysine.  
Keyword
 Acetylation; Complete proteome; Developmental protein; DNA-binding; Homeobox; Nucleus; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 361 AA 
Protein Sequence
MTGKAGEALS KPKSETVAKS TSGGAPARCT GFGIQEILGL NKEPPSSHPR AALDGLAPGH 60
LLAARSVLSP AGVGSMGLLG PGGLPGFYTQ PTFLEVLSDP QSVHLQPLGR ASGPLDTSQT 120
ASSDSEDVSS SDRKMSKSAL NQTKKRKKRR HRTIFTSYQL EELEKAFNEA HYPDVYAREM 180
LAMKTELPED RIQVWFQNRR AKWRKREKCW GRSSVMAEYG LYGAMVRHSI PLPESILKSA 240
KDGIMDSCAP WLLGMHKKSL EAAAESGRKP EVERQALPKL DKMEQEERAP EAQAAISQEE 300
LRENSIAALR AKAQEHSTKV LGTVSGPDSL ARNAEKPEEE DATEEDRPAE KLSPPQLEDM 360
A 361 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:MGI.
 GO:0005730; C:nucleolus; IEA:Compara.
 GO:0005634; C:nucleus; IDA:MGI.
 GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
 GO:0045165; P:cell fate commitment; IMP:MGI.
 GO:0008285; P:negative regulation of cell proliferation; IMP:MGI.
 GO:0008284; P:positive regulation of cell proliferation; IMP:MGI.
 GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.
 GO:0060040; P:retinal bipolar neuron differentiation; IMP:MGI.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR023339; CVC.
 IPR017970; Homeobox_CS.
 IPR001356; Homeodomain.
 IPR009057; Homeodomain-like.
 IPR003654; OAR_dom. 
Pfam
 PF00046; Homeobox
 PF03826; OAR 
SMART
 SM00389; HOX 
PROSITE
 PS51496; CVC
 PS00027; HOMEOBOX_1
 PS50071; HOMEOBOX_2
 PS50803; OAR 
PRINTS