CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-000782
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein SCO2 homolog, mitochondrial 
Protein Synonyms/Alias
  
Gene Name
 SCO2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
196LGLTGSTKQVAQASHubiquitination[1, 2, 3]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Acts as a copper chaperone, transporting copper to the Cu(A) site on the cytochrome c oxidase subunit II (COX2). 
Sequence Annotation
 DOMAIN 85 259 Thioredoxin.
 METAL 133 133 Copper.
 METAL 137 137 Copper.
 METAL 224 224 Copper.  
Keyword
 3D-structure; Cardiomyopathy; Chaperone; Complete proteome; Copper; Disease mutation; Metal-binding; Mitochondrion; Polymorphism; Reference proteome; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 266 AA 
Protein Sequence
MLLLTRSPTA WHRLSQLKPR VLPGTLGGQA LHLRSWLLSR QGPAETGGQG QPQGPGLRTR 60
LLITGLFGAG LGGAWLALRA EKERLQQQKR TEALRQAAVG QGDFHLLDHR GRARCKADFR 120
GQWVLMYFGF THCPDICPDE LEKLVQVVRQ LEAEPGLPPV QPVFITVDPE RDDVEAMARY 180
VQDFHPRLLG LTGSTKQVAQ ASHSYRVYYN AGPKDEDQDY IVDHSIAIYL LNPDGLFTDY 240
YGRSRSAEQI SDSVRRHMAA FRSVLS 266 
Gene Ontology
 GO:0005743; C:mitochondrial inner membrane; IEA:InterPro.
 GO:0005739; C:mitochondrion; TAS:UniProtKB.
 GO:0005507; F:copper ion binding; NAS:UniProtKB.
 GO:0006878; P:cellular copper ion homeostasis; IEA:InterPro.
 GO:0006825; P:copper ion transport; IEA:InterPro.
 GO:0001701; P:in utero embryonic development; IEA:Compara.
 GO:0003012; P:muscle system process; IEA:Compara.
 GO:0055114; P:oxidation-reduction process; TAS:UniProtKB.
 GO:0008535; P:respiratory chain complex IV assembly; IEA:Compara.
 GO:0022904; P:respiratory electron transport chain; IEA:Compara.
 GO:0014823; P:response to activity; IEA:Compara. 
Interpro
 IPR003782; SCO1/SenC.
 IPR017276; Synth_of_cyt-c-oxidase_Sco1/2.
 IPR012336; Thioredoxin-like_fold. 
Pfam
 PF02630; SCO1-SenC 
SMART
  
PROSITE
 PS51352; THIOREDOXIN_2 
PRINTS