CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-030622
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 
Protein Synonyms/Alias
 cDNA FLJ43472 fis, clone OCBBF2037638 
Gene Name
 PYROXD1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
17KVIESGVKQLKSEEHubiquitination[1]
37DGNQHVYKKLCLCAGubiquitination[1]
38GNQHVYKKLCLCAGAubiquitination[1]
46LCLCAGAKPKLICEGubiquitination[1]
71DSAQEFQKQLTKAKRubiquitination[1, 2, 3]
107VIWAIKDKAIGNTFFubiquitination[1]
125AAEFLTSKLIAEKSEubiquitination[1]
130TSKLIAEKSEAKIAHubiquitination[1]
175WHEGLNLKGTKEFSHubiquitination[1]
194ETMCEVKKIYLQDEFubiquitination[1]
207EFRILKKKSFTFPRDubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 429 AA 
Protein Sequence
MLGKRFPNIK VIESGVKQLK SEEHCIVTED GNQHVYKKLC LCAGAKPKLI CEGNPYVLGI 60
RDTDSAQEFQ KQLTKAKRIM IIGNGGIALE LVYEIEGCEV IWAIKDKAIG NTFFDAGAAE 120
FLTSKLIAEK SEAKIAHKRT RYTTEGRKKE ARSKSKADNV GSALGPDWHE GLNLKGTKEF 180
SHKIHLETMC EVKKIYLQDE FRILKKKSFT FPRDHKSVTA DTEMWPVYVE LTNEKIYGCD 240
FIVSATGVTP NVEPFLHGNS FDLGEDGGLK VDDHMHTSLP DIYAAGDICT TSWQLSPVWQ 300
QMRLWTQARQ MGWYAAKCMA AASSGDSIDM DFSFELFAHV TKFFNYKVVL LGKYNAQGLG 360
SDHELMLRCT KGREYIKVVM QNGRMMGAVL IGETDLEETF ENLILNQMNL SSYGEDLLDP 420
NIDIEDYFD 429 
Gene Ontology
 GO:0016491; F:oxidoreductase activity; IEA:InterPro. 
Interpro
 IPR023753; Pyr_nucl-diS_OxRdtase_FAD/NAD. 
Pfam
 PF07992; Pyr_redox_2 
SMART
  
PROSITE
  
PRINTS