CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-000369
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Serine/threonine-protein kinase DCLK1 
Protein Synonyms/Alias
 Doublecortin domain-containing protein 3A; Doublecortin-like and CAM kinase-like 1; Doublecortin-like kinase 1 
Gene Name
 DCLK1 
Gene Synonyms/Alias
 DCAMKL1; DCDC3A; KIAA0369 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
280ESECRVVKSTSYTKIubiquitination[1, 2]
286VKSTSYTKIASSSRRubiquitination[1, 2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
 Probable kinase that may be involved in a calcium- signaling pathway controlling neuronal migration in the developing brain. May also participate in functions of the mature nervous system. 
Sequence Annotation
 DOMAIN 57 143 Doublecortin 1.
 DOMAIN 186 269 Doublecortin 2.
 DOMAIN 390 647 Protein kinase.
 NP_BIND 396 404 ATP (By similarity).
 ACT_SITE 511 511 Proton acceptor (By similarity).
 BINDING 419 419 ATP (By similarity).
 MOD_RES 32 32 Phosphoserine (By similarity).
 MOD_RES 36 36 Phosphoserine (By similarity).
 MOD_RES 305 305 Phosphoserine (By similarity).
 MOD_RES 307 307 Phosphoserine (By similarity).
 MOD_RES 330 330 Phosphoserine (By similarity).
 MOD_RES 332 332 Phosphoserine (By similarity).
 MOD_RES 336 336 Phosphothreonine (By similarity).
 MOD_RES 337 337 Phosphoserine (By similarity).
 MOD_RES 352 352 Phosphoserine.
 MOD_RES 364 364 Phosphoserine (By similarity).
 MOD_RES 376 376 Phosphoserine (By similarity).
 MOD_RES 493 493 Phosphotyrosine (By similarity).
 MOD_RES 520 520 Phosphotyrosine (By similarity).
 MOD_RES 722 722 Phosphoserine (By similarity).
 MOD_RES 726 726 Phosphoserine (By similarity).  
Keyword
 3D-structure; Alternative splicing; ATP-binding; Complete proteome; Developmental protein; Differentiation; Kinase; Neurogenesis; Nucleotide-binding; Phosphoprotein; Polymorphism; Reference proteome; Repeat; Serine/threonine-protein kinase; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 740 AA 
Protein Sequence
MSFGRDMELE HFDERDKAQR YSRGSRVNGL PSPTHSAHCS FYRTRTLQTL SSEKKAKKVR 60
FYRNGDRYFK GIVYAISPDR FRSFEALLAD LTRTLSDNVN LPQGVRTIYT IDGLKKISSL 120
DQLVEGESYV CGSIEPFKKL EYTKNVNPNW SVNVKTTSAS RAVSSLATAK GSPSEVRENK 180
DFIRPKLVTI IRSGVKPRKA VRILLNKKTA HSFEQVLTDI TDAIKLDSGV VKRLYTLDGK 240
QVMCLQDFFG DDDIFIACGP EKFRYQDDFL LDESECRVVK STSYTKIASS SRRSTTKSPG 300
PSRRSKSPAS TSSVNGTPGS QLSTPRSGKS PSPSPTSPGS LRKQRSSQHG GSSTSLASTK 360
VCSSMDENDG PGEEVSEEGF QIPATITERY KVGRTIGDGN FAVVKECVER STAREYALKI 420
IKKSKCRGKE HMIQNEVSIL RRVKHPNIVL LIEEMDVPTE LYLVMELVKG GDLFDAITST 480
NKYTERDASG MLYNLASAIK YLHSLNIVHR DIKPENLLVY EHQDGSKSLK LGDFGLATIV 540
DGPLYTVCGT PTYVAPEIIA ETGYGLKVDI WAAGVITYIL LCGFPPFRGS GDDQEVLFDQ 600
ILMGQVDFPS PYWDNVSDSA KELITMMLLV DVDQRFSAVQ VLEHPWVNDD GLPENEHQLS 660
VAGKIKKHFN TGPKPNSTAA GVSVIATTAL DKERQVFRRR RNQDVRSRYK AQPAPPELNS 720
ESEDYSPSSS ETVRSPNSPF 740 
Gene Ontology
 GO:0005887; C:integral to plasma membrane; TAS:ProtInc.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0004672; F:protein kinase activity; TAS:ProtInc.
 GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
 GO:0005057; F:receptor signaling protein activity; TAS:ProtInc.
 GO:0048675; P:axon extension; IEA:Compara.
 GO:0007417; P:central nervous system development; TAS:ProtInc.
 GO:0021952; P:central nervous system projection neuron axonogenesis; IEA:Compara.
 GO:0048813; P:dendrite morphogenesis; IEA:Compara.
 GO:0016197; P:endosomal transport; NAS:UniProtKB.
 GO:0030900; P:forebrain development; IEA:Compara.
 GO:0035556; P:intracellular signal transduction; IEA:InterPro.
 GO:0001764; P:neuron migration; IEA:Compara.
 GO:0009615; P:response to virus; IEP:UniProtKB. 
Interpro
 IPR020636; Ca/CaM-dep_Ca-dep_prot_Kinase.
 IPR003533; Doublecortin_dom.
 IPR011009; Kinase-like_dom.
 IPR000719; Prot_kinase_cat_dom.
 IPR017441; Protein_kinase_ATP_BS.
 IPR002290; Ser/Thr_dual-sp_kinase_dom.
 IPR008271; Ser/Thr_kinase_AS. 
Pfam
 PF03607; DCX
 PF00069; Pkinase 
SMART
 SM00537; DCX
 SM00220; S_TKc 
PROSITE
 PS50309; DC
 PS00107; PROTEIN_KINASE_ATP
 PS50011; PROTEIN_KINASE_DOM
 PS00108; PROTEIN_KINASE_ST 
PRINTS