CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-037504
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Exosome complex component RRP41 
Protein Synonyms/Alias
  
Gene Name
 EXOSC4 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
118RRPHGDRKSCEMGLQubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 262 AA 
Protein Sequence
MFVNLGWQGM GQGWTQGSQL KGARGRHMQD RERKTGGFVL EVTQLPLAEA LKVEGEADPQ 60
RTVECELEGV GLAHVSVLFQ IRGSRARALP DRALVNCQYS SATFSTGERK RRPHGDRKSC 120
EMGLQLRQTF EAAILTQLHP RSQIDIYVQV LQADGGTYAA CVNAATLAVL DAGIPMRDFV 180
CACSAGFVDG TALADLSHVE EAAGGPQLAL ALLPASGQIA LLEMDARLHE DHLERVLEAA 240
AQAARDVHTL LDRVVRQHVR EA 262 
Gene Ontology
  
Interpro
 IPR001247; ExoRNase_PH_dom1.
 IPR015847; ExoRNase_PH_dom2.
 IPR027408; PNPase/RNase_PH_dom.
 IPR020568; Ribosomal_S5_D2-typ_fold. 
Pfam
 PF01138; RNase_PH
 PF03725; RNase_PH_C 
SMART
  
PROSITE
  
PRINTS