CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-041395
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 DDB1- and CUL4-associated factor 4 
Protein Synonyms/Alias
 WD repeat domain 21A, isoform CRA_c 
Gene Name
 DCAF4 
Gene Synonyms/Alias
 WDR21A; hCG_21523 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
108IINLQSLKTPTLKVFubiquitination[1, 2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome; Repeat; WD repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 333 AA 
Protein Sequence
MESKRLRLLQ EEDRRKKIAR MGFNASSMLR KSQLGFLNVT NYCHLAHELR LSCMERKKVQ 60
IRSMDPSALA SDRFNLILAD TNSDRLFTVN DVKVGGSKYG IINLQSLKTP TLKVFMHENL 120
YFTNRKVNSV CWASLNHLDS HILLCLMGLA ETPGCATLLP ASLFVNSHPG IDRPGMLCSF 180
RIPGAWSCAW SLNIQANNCF STGLSRRVLL TNVVTGHRQS FGTNSDVLAQ QFALMAPLLF 240
NGCRSGEIFA IDLRCGNQGK GWKATRLFHD SAVTSVRILQ DEQYLMASDM AGKIKLWDLR 300
TTKCVRQYEG HVNEYAYLPL HVHEEEGILV AGT 333 
Gene Ontology
  
Interpro
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF00400; WD40 
SMART
 SM00320; WD40 
PROSITE
 PS50082; WD_REPEATS_2
 PS50294; WD_REPEATS_REGION 
PRINTS