CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-031517
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 cDNA FLJ54776, highly similar to Cell division control protein 42 homolog 
Protein Synonyms/Alias
  
Gene Name
  
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
5***MQTIKCVVVGDGubiquitination[1]
152EITHHCPKTPFLLVGubiquitination[2]
178IEKLAKNKQKPITPEubiquitination[3]
180KLAKNKQKPITPETAubiquitination[2]
189ITPETAEKLARDLKAubiquitination[2]
198ARDLKAVKYVECSALubiquitination[1, 2, 3]
208ECSALTQKGLKNVFDubiquitination[1, 2]
228ALEPPEPKKSRRCVLubiquitination[1, 2]
229LEPPEPKKSRRCVLLubiquitination[1, 2]
Reference
 [1] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [3] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724
Functional Description
  
Sequence Annotation
  
Keyword
 Cell cycle; Cell division; GTP-binding; Membrane; Nucleotide-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 236 AA 
Protein Sequence
MQTIKCVVVG DGAVGKTCLL ISYTTNKFPS EYVPTLKNQW KVRRGDTGFA RSAGRQNSSR 60
QDSNEWWSQF GEVCPTSWNE VFDNYAVTVM IGGEPYTLGL FDTAGQEDYD RLRPLSYPQT 120
DVFLVCFSVV SPSSFENVKE KWVPEITHHC PKTPFLLVGT QIDLRDDPST IEKLAKNKQK 180
PITPETAEKL ARDLKAVKYV ECSALTQKGL KNVFDEAILA ALEPPEPKKS RRCVLL 236 
Gene Ontology
 GO:0005622; C:intracellular; IEA:InterPro.
 GO:0016020; C:membrane; IEA:UniProtKB-KW.
 GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
 GO:0051301; P:cell division; IEA:UniProtKB-KW.
 GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro. 
Interpro
 IPR027417; P-loop_NTPase.
 IPR005225; Small_GTP-bd_dom.
 IPR001806; Small_GTPase.
 IPR003578; Small_GTPase_Rho. 
Pfam
 PF00071; Ras 
SMART
 SM00174; RHO 
PROSITE
 PS51420; RHO 
PRINTS
 PR00449; RASTRNSFRMNG.