CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-043596
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1 
Protein Synonyms/Alias
  
Gene Name
 OGFOD1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
257ILLKEFLKPEKFTKVubiquitination[1]
263LKPEKFTKVCEALEHubiquitination[1, 2]
288PNKRFYEKAEESKLPubiquitination[1, 2]
293YEKAEESKLPEILKEubiquitination[1]
385PEENETKKESSVPMCubiquitination[1, 2]
400QGELRHWKTGHYTLIubiquitination[1]
468YRDRETLKFVKHINHubiquitination[1, 2, 3]
471RETLKFVKHINHRSLubiquitination[2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [3] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 499 AA 
Protein Sequence
MNGKRPAEPG PARVGKKGKK EVMAEFSDAV TEETLKKQVA EAWSRRTPFS HEVIVMDMDP 60
FLHCVIPNFI QSQDFLEGLQ KELMNLDFHE KYNDLYKFQQ SDDLKKRREP HISTLRKILF 120
EDFRSWLSDI SKIDLESTID MSCAKYEFTD ALLCHDDELE GRRIAFILYL VPPWDRSMGG 180
TLDLYSIDEH FQPKQIVKSL IPSWNKLVFF EVSPVSFHQH EILYDWINPT YLDMDYQVQI 240
QEEFEESSEI LLKEFLKPEK FTKVCEALEH GHVEWSSRGP PNKRFYEKAE ESKLPEILKE 300
CMKLFRSEAL FLLLSNFTGL KLHFLAPSEE DEMNDKKEAE TTDITEEGTS HSPPEPENNQ 360
MAISNNSQQS NEQTDPEPEE NETKKESSVP MCQGELRHWK TGHYTLIHDH SKAEFALDLI 420
LYCGCEGWEP EYGGFTSYIA KGEDEELLTV NPESNSLALV YRDRETLKFV KHINHRSLEQ 480
KKTFPNRTGF WDFSFIYYE 499 
Gene Ontology
 GO:0005506; F:iron ion binding; IEA:InterPro.
 GO:0031418; F:L-ascorbic acid binding; IEA:InterPro.
 GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro. 
Interpro
 IPR019601; Oxoglutarate/Fe-dep_Oase_C.
 IPR006620; Pro_4_hyd_alph. 
Pfam
 PF10637; Ofd1_CTDD 
SMART
 SM00702; P4Hc 
PROSITE
  
PRINTS