CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-039615
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial 
Protein Synonyms/Alias
  
Gene Name
 SUCLA2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
20VPKGYVAKSPDEAYAubiquitination[1]
30DEAYAIAKKLGSKDVacetylation[2]
31EAYAIAKKLGSKDVVubiquitination[3]
85IGKKLFTKQTGEKGRubiquitination[2, 3]
359GTRVDDAKALIADSGubiquitination[1]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Ligase; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 405 AA 
Protein Sequence
MSMELLQEAG VSVPKGYVAK SPDEAYAIAK KLGSKDVVIK AQVLAGGRGK GTFESGLKGG 60
VKIVFSPEEA KAVSSQMIGK KLFTKQTGEK GRICNQVLVC ERKYPRREYY FAITMERSFQ 120
GPVLIGSSHG GVNIEDVAAE SPEAIIKEPI DIEEGIKKEQ ALQLAQKMGF PPNIVESAAE 180
NMVKLYSLFL KYDATMIEIN PMVEDSDGAV LCMDAKINFD SNSAYRQKKI FDLQDWTQED 240
ERDKDAAKAN LNYIGLDGNI GCLVNGAGLA MATMDIIKLH GGTPANFLDV GGGATVHQVT 300
EAFKLITSDK KVLAILVNIF GGIMRCDVIA QGIVMAVKDL EIKIPVVVRL QGTRVDDAKA 360
LIADSGLKIL ACDDLDEAAR MVVKLSEIVT LAKQAHVDVK FQLPI 405 
Gene Ontology
 GO:0005739; C:mitochondrion; IEA:Compara.
 GO:0005524; F:ATP binding; IEA:InterPro.
 GO:0046872; F:metal ion binding; IEA:InterPro.
 GO:0004775; F:succinate-CoA ligase (ADP-forming) activity; IEA:Compara.
 GO:0006105; P:succinate metabolic process; IEA:Compara.
 GO:0006104; P:succinyl-CoA metabolic process; IEA:Compara.
 GO:0006099; P:tricarboxylic acid cycle; IEA:Compara. 
Interpro
 IPR011761; ATP-grasp.
 IPR013650; ATP-grasp_succ-CoA_synth-type.
 IPR013815; ATP_grasp_subdomain_1.
 IPR013816; ATP_grasp_subdomain_2.
 IPR005811; CoA_ligase.
 IPR017866; Succ-CoA_synthase_bsu_CS.
 IPR005809; Succ_CoA_synthase_bsu.
 IPR016102; Succinyl-CoA_synth-like. 
Pfam
 PF08442; ATP-grasp_2
 PF00549; Ligase_CoA 
SMART
  
PROSITE
 PS50975; ATP_GRASP
 PS01217; SUCCINYL_COA_LIG_3 
PRINTS