CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003741
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 60S ribosomal protein L1-B 
Protein Synonyms/Alias
 L10a 
Gene Name
 RPL1B 
Gene Synonyms/Alias
 SSM1B; SSM2; YGL135W; G2834 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
47NYDPQRDKRFSGSLKmethylation[1]
133PQLSKAGKFPTPVSHubiquitination[2]
Reference
 [1] The ribosomal l1 protuberance in yeast is methylated on a lysine residue catalyzed by a seven-beta-strand methyltransferase.
 Webb KJ, Al-Hadid Q, Zurita-Lopez CI, Young BD, Lipson RS, Clarke SG.
 J Biol Chem. 2011 May 27;286(21):18405-13. [PMID: 21460220]
 [2] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047
Functional Description
  
Sequence Annotation
 MOD_RES 2 2 N-acetylserine.
 MOD_RES 47 47 N6-methyllysine; by RKM5.
 MOD_RES 79 79 Phosphoserine.
 MOD_RES 86 86 Phosphoserine.  
Keyword
 Acetylation; Complete proteome; Cytoplasm; Methylation; Phosphoprotein; Reference proteome; Ribonucleoprotein; Ribosomal protein. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 217 AA 
Protein Sequence
MSKITSSQVR EHVKELLKYS NETKKRNFLE TVELQVGLKN YDPQRDKRFS GSLKLPNCPR 60
PNMSICIFGD AFDVDRAKSC GVDAMSVDDL KKLNKNKKLI KKLSKKYNAF IASEVLIKQV 120
PRLLGPQLSK AGKFPTPVSH NDDLYGKVTD VRSTIKFQLK KVLCLAVAVG NVEMEEDVLV 180
NQILMSVNFF VSLLKKNWQN VGSLVVKSSM GPAFRLY 217 
Gene Ontology
 GO:0022625; C:cytosolic large ribosomal subunit; TAS:SGD.
 GO:0003723; F:RNA binding; IEA:InterPro.
 GO:0003735; F:structural constituent of ribosome; TAS:SGD.
 GO:0002181; P:cytoplasmic translation; TAS:SGD. 
Interpro
 IPR002143; Ribosomal_L1.
 IPR016094; Ribosomal_L1_2-a/b-sand.
 IPR016095; Ribosomal_L1_3-a/b-sand.
 IPR023673; Ribosomal_L1_CS.
 IPR023674; Ribosomal_L1_SF. 
Pfam
 PF00687; Ribosomal_L1 
SMART
  
PROSITE
 PS01199; RIBOSOMAL_L1 
PRINTS