CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-037036
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Syndecan 
Protein Synonyms/Alias
  
Gene Name
 SDC2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
149SYDLGERKPSSAAYQubiquitination[1]
157PSSAAYQKAPTKEFYubiquitination[1, 2]
161AYQKAPTKEFYA***ubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [2] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094
Functional Description
 Cell surface proteoglycan (By similarity). 
Sequence Annotation
  
Keyword
 Complete proteome; Glycoprotein; Heparan sulfate; Membrane; Proteoglycan; Reference proteome; Transmembrane. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 165 AA 
Protein Sequence
MRRAWILLTL GLVACVSAES VRADEDVESP ELTTSRPLPK ILLTSAAPKV ETTTLNIQNK 60
IPAQTKSPEE TDKEKVHLSD SERKMDPAEE DTNVYTEKHS DSLFKRTEVL AAVIAGGVIG 120
FLFAIFLILL LVYRMRKKDE GSYDLGERKP SSAAYQKAPT KEFYA 165 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW. 
Interpro
 IPR003585; Neurexin-like.
 IPR001050; Syndecan. 
Pfam
 PF01034; Syndecan 
SMART
 SM00294; 4.1m 
PROSITE
 PS00964; SYNDECAN 
PRINTS