CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011426
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Uncharacterized ATP-dependent helicase IRC20 
Protein Synonyms/Alias
 Increased recombination centers protein 20 
Gene Name
 IRC20 
Gene Synonyms/Alias
 YLR247C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
605IKLRNEAKDYTSNDFubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Is probably involved in a pathway contributing to genomic integrity. 
Sequence Annotation
 DOMAIN 378 583 Helicase ATP-binding.
 DOMAIN 1363 1531 Helicase C-terminal.
 NP_BIND 391 398 ATP (By similarity).
 ZN_FING 1239 1277 RING-type.
 MOD_RES 810 810 Phosphoserine.  
Keyword
 ATP-binding; Complete proteome; Helicase; Hydrolase; Metal-binding; Nucleotide-binding; Nucleus; Phosphoprotein; Reference proteome; Stress response; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1556 AA 
Protein Sequence
MSAVGALLAR EYNVTAEKCD FFLENGSFDS VIAALPALNQ EQETVTQKVS KNGKELINVA 60
SVNIEIPERI SLSNNGRQLF KFIVDIEILP CENDNEATLV VSSDSVSLFQ IGFKMENNSK 120
IAVDKQLPLI LDICAHKNQE RALRNQLENR KSLERKPSRK RRKKNSNVND PEKLLKSRIH 180
ELSLSYKDFE CSPVVFRYND SSLTWVLSFN LKLKFLNNKF NRFSVEANQI LDLTFSNRDE 240
NEFERYHKHS HIHSNFIQKQ FISQILEYSK DRLSKIKPFL PQSIPDLKVN LLPFQRESVE 300
WMLIKEGHGN SLSDTPTVID EVGLIDFMNE YYAYGYELIA RSPDEVGPSL LWNKLTGYIL 360
TTEDAAHLYN QYRKERLSGD YPVCAKGVLA EEMGLGKTIE ILSLILLNRR KLKDSEATFI 420
DDENRTITKT KTTLIICPNA ILKQWLEEIE LHANSLKWYT YRGYNEIMKD CKTVDEAVQQ 480
LCQYDIIVTS YNIIATEVHH AEFNRSIRSR RLKSPKYDYS SPLALMQFYR IILDEVQMLR 540
SSSTYSAKCT SLLHRIHTWG VSGTPIQNIY NFRMIMSYLK LHPFCDEVDF IRTLQEEIKL 600
RNEAKDYTSN DFVCQLKGVR FSIKDCMNIF YRYDLCIRHS KANVASQIHI PRQHNFIIPL 660
EFAPIEWDNY LNLWNNFLEL SGYNSDGSGS PRVSNAFLNE WLSRLRYICC HALFPEILST 720
RQKRLHGHLS RISNIDDILI SMRMDAFDSL IGYYRERFHL SIKQAQYELE ISNTPAKALE 780
SFIKIRDDLM IHIRQKFNVE DPFDKSLNLS EDEDEHMDER FGEKETSSGD ESDREINGAK 840
NHDNHNNDGM LSNHLKKKGL RAMMNLLHDC YFFLGSVYYN LGTRKLEEAD DKHRKEKTEE 900
VVYSDVFPKN ELEEIEENRL LEQENYANAE ILRKSILSSE ARKVDMTIKM ARTKFAPMTS 960
NIPLRLINIE FDHKNDYSSN LAVSRCFKSL SKLIEGLNEQ TKNFNELLDE LLIIIYEPVH 1020
RTEDDDSTNK IIGNEEYSTS IDSQDKIFSL LGCLEIILQN RDNILTSESE VKIPKHLVPE 1080
GSIISKYQKQ LLNSLRLISG TPLRTVFDEL KNSRIVRRIS SSNESESTIQ NFEDYLLQYE 1140
VESKSLFKYN KQVRESLKIL GSIYNAKTEY YSQLQRISDS LVSLHSLSAP QLSHLIRTIN 1200
KSLGGTLDAK INNIESRLIY LKNLSRLKDT LNDNQILSCS ICLGEVEIGA IIKCGHYFCK 1260
SCILTWLRAH SKCPICKGFC SISEVYNFKF KNSTEKREKE IQEPRREGAD SSQDNSNENS 1320
IISNMSEVEK LFGNKYEQFH QINEVHQIHI KESFGAKIDF VIKLISYLRL KSEQENADPP 1380
QVILYSQKTE YLKVIGKVLK LYHIEHLACL SNTANVGETI NNFKRQPSVT CLLLNVKTLG 1440
AGLNLINAKH IFLLDPILNN SDELQAMGRN NRIGQDEETF VWNFMIRNTV EENILRYKCI 1500
LEERKRKEKS KKGDKYDEAQ DETDNEESDD AKFEISVVDQ EVSNEHLWNC FFHGSD 1556 
Gene Ontology
 GO:0005739; C:mitochondrion; IDA:SGD.
 GO:0005634; C:nucleus; IDA:SGD.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0004386; F:helicase activity; ISS:SGD.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0045003; P:double-strand break repair via synthesis-dependent strand annealing; IMP:SGD. 
Interpro
 IPR014001; Helicase_ATP-bd.
 IPR001650; Helicase_C.
 IPR027417; P-loop_NTPase.
 IPR000330; SNF2_N.
 IPR001841; Znf_RING.
 IPR013083; Znf_RING/FYVE/PHD.
 IPR017907; Znf_RING_CS. 
Pfam
 PF00176; SNF2_N 
SMART
 SM00487; DEXDc
 SM00490; HELICc
 SM00184; RING 
PROSITE
 PS51192; HELICASE_ATP_BIND_1
 PS51194; HELICASE_CTER
 PS00518; ZF_RING_1
 PS50089; ZF_RING_2 
PRINTS