UniProt Accession

 RL16A_YEAST; P26784; D6VVF4 

Genbank Protein ID

 Z38059; BK006942 

Genbank Nucleotide ID

 CAA86145.1; DAA08420.1 

Protein Name

 60S ribosomal protein L16-A 

Protein Synonyms/Alias

 L13a; L21; RP22; YL15 

Gene Name

 RPL16A 

Gene Synonyms/Alias

 RPL13; RPL21A; YIL133C 

Created Date

 July 27, 2013 

Organism

 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 

NCBI Taxa ID

 559292 

Lysine Modification

Position	Peptide	Type	References
25	RLASVVAKQLLNGQK	ubiquitination	[1]
53	EFFRNKLKYHDFLRK	acetylation	[2]
53	EFFRNKLKYHDFLRK	ubiquitination	[1]
66	RKATAFNKTRGPFHF	ubiquitination	[1]
91	LRGMVSHKTARGKAA	ubiquitination	[1]
134	LRLKPGRKYTTLGKL	ubiquitination	[1]
140	RKYTTLGKLSTSVGW	acetylation	[2]
140	RKYTTLGKLSTSVGW	ubiquitination	[1]
148	LSTSVGWKYEDVVAK	acetylation	[2]
148	LSTSVGWKYEDVVAK	methylation	[3]
155	KYEDVVAKLEAKRKV	acetylation	[2]
155	KYEDVVAKLEAKRKV	ubiquitination	[1]
161	AKLEAKRKVSSAEYY	ubiquitination	[1]
170	SSAEYYAKKRAFTKK	acetylation	[2]
170	SSAEYYAKKRAFTKK	ubiquitination	[1]
177	KKRAFTKKVASANAT	ubiquitination	[1, 4]
192	AAESDVAKQLAALGY	acetylation	[2]
192	AAESDVAKQLAALGY	ubiquitination	[1]

Reference

 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, Villén J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [2] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919]
 [3] Identification of arginine- and lysine-methylation in the proteome of Saccharomyces cerevisiae and its functional implications.
 Pang CN, Gasteiger E, Wilkins MR.
 BMC Genomics. 2010 Feb 5;11:92. [PMID: 20137074]
 [4] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047] 

Functional Description

  

Sequence Annotation

 MOD_RES 2 2 N-acetylserine.  

Keyword

 3D-structure; Acetylation; Complete proteome; Cytoplasm; Direct protein sequencing; Reference proteome; Ribonucleoprotein; Ribosomal protein. 

Sequence Source

 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 

Protein Length

 199 AA 

Protein Sequence

Gene Ontology

 GO:0022625; C:cytosolic large ribosomal subunit; TAS:SGD.
 GO:0003723; F:RNA binding; IDA:SGD.
 GO:0003735; F:structural constituent of ribosome; TAS:SGD.
 GO:0002181; P:cytoplasmic translation; TAS:SGD. 

Interpro

 IPR005822; Ribosomal_L13.
 IPR023563; Ribosomal_L13_CS.
 IPR023564; Ribosomal_L13_dom.
 IPR005755; Ribosomal_L13_euk/arc. 

Pfam

 PF00572; Ribosomal_L13 

SMART

  

PROSITE

 PS00783; RIBOSOMAL_L13 

PRINTS