CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016195
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 RPA-interacting protein 
Protein Synonyms/Alias
 hRIP 
Gene Name
 RPAIN 
Gene Synonyms/Alias
 RIP 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
14SPRRSLYKLVGSPPWubiquitination[1, 2, 3]
22LVGSPPWKEAFRQRCubiquitination[1, 2, 3]
171SSELTEQKLRACLEGubiquitination[2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Mediates the import of RPA complex into the nucleus, possibly via some interaction with importin beta. Isoform 2 is sumoylated and mediates the localization of RPA complex into the PML body of the nucleus, thereby participating in RPA function in DNA metabolism. 
Sequence Annotation
 ZN_FING 137 212 RIP-type.
 REGION 164 180 Mediates nuclear export.
 CROSSLNK 103 103 Glycyl lysine isopeptide (Lys-Gly)
 CROSSLNK 121 121 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 Alternative splicing; Complete proteome; Cytoplasm; Isopeptide bond; Metal-binding; Nucleus; Polymorphism; Reference proteome; Ubl conjugation; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 219 AA 
Protein Sequence
MAESLRSPRR SLYKLVGSPP WKEAFRQRCL ERMRNSRDRL LNRYRQAGSS GPGNSQNSFL 60
VQEVMEEEWN ALQSVENCPE DLAQLEELID MAVLEEIQQE LIKQEQSIIS EYEKSLQFDE 120
KCLSIMLAEW EANPLICPVC TKYNLRITSG VVVCQCGLSI PSHSSELTEQ KLRACLEGSI 180
NEHSAHCPHT PEFSVTGGTE EKSSLLMSCL ACDTWAVIL 219 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:MGI.
 GO:0005730; C:nucleolus; IDA:HPA.
 GO:0016605; C:PML body; IDA:MGI.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0006310; P:DNA recombination; IPI:MGI.
 GO:0006281; P:DNA repair; IPI:MGI.
 GO:0006261; P:DNA-dependent DNA replication; IPI:MGI.
 GO:0006606; P:protein import into nucleus; IDA:MGI.
 GO:0009411; P:response to UV; IDA:MGI. 
Interpro
  
Pfam
  
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PRINTS