CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035549
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein LOC685179 
Protein Synonyms/Alias
  
Gene Name
 Smarcc2 
Gene Synonyms/Alias
 LOC685179 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
578VPEAAKGKPELQGSAacetylation[1]
595QMLNFPDKGKEKPADacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Nucleus; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1130 AA 
Protein Sequence
MAVRKKDGGP NVKYYEAADT VTQFDNVRLW LGKNYKKYIQ AEPPTNKSLS SLVVQLLQFQ 60
EEVFGKHVSN APLTKLPIKC FLDFKAGGSL CHILAAAYKF KSDQGWRRYD FQNPSRMDRN 120
VEMFMTIEKS LVQNNCLSRP NIFLCPEIEP KLLGKLKDIV KRHQGTISED KSNASHVVYP 180
APGNLEEEEW VRPVMKRDKQ VLLHWGYYPD SYDTWIPASE IEASVEDAPT PEKPRKVHAK 240
WILDTDTFNE WMNEEDYEVS DDKSPVSRRK KISAKTLTDE VNSPDADRRD KKGGNYKKRK 300
RSPSPSPTPE AKKKNAKKGP STPYTKSKRG HREEEQEDLT KDMDEPSPVP NVEEVTLPKT 360
VNTKKDSESA PVKGGTMTDL DEQDDESMET TGKDEDENST GNKGEQTKSA DLHEDNVTEQ 420
THHIIVPSYA AWFDYNSVHA IERRALPEFF NGKNKSKTPE IYLAYRNFMI DTYRLNPQEY 480
LTSTACRRNL AGDVCAIMRV HAFLEQWGLI NYQVDAESRP TPMGPPPTSH FHVLADTPSG 540
LVPLQPKPPQ GRQVDADTKA GRKGKELDDL VPEAAKGKPE LQGSASQQML NFPDKGKEKP 600
ADMQNFGLRT DMYTKKNIPS KSKAAASATR EWTEQETLLL LEALEMYKDD WNKVSEHVGS 660
RTQDECILHF LRLPIEDPYL EDSEASLGPL AYQPIPFSQS GNPVMSTVAF LASVVDPRVA 720
SAAAKSALEE FSKMKEEVPT ALVEAHVRKV EEAAKVTGKA DPAFGLESSG IAGTASDEPE 780
RIEESGTEEA RAESQAADEK KEPKEPREGG GAVEEEAKEE ISEAPKKDEE KGKEADSEKE 840
SEKSDGDPIV DPEKDKEPTE GQEEGLKEVA EPEGERKAKV ERDIGEGNLS TAAAAALAAA 900
AVKAKHLAAV EERKIKSLVA LLVETQMKKL EIKLRHFEEL ETIMDREREA LEYQRQQLLA 960
DRQAFHMEQL KYAEMRARQQ HFQQMQQQPP PPPPPLPPGS QPIPPTGAAA PATVHGLAVA 1020
PASVASAPPG GGAPPGTLGP SEQIGQAGTT AGPQQPQQAG APQPGAVPPG VPPPGPHGPS 1080
PFPNQQTPPS MMPGAVPGSG HPGVADPGTP LPPDPTAPSP GTVTPVPPPQ 1130 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-KW.
 GO:0003682; F:chromatin binding; IEA:InterPro.
 GO:0003677; F:DNA binding; IEA:InterPro. 
Interpro
 IPR001357; BRCT_dom.
 IPR000953; Chromo_domain/shadow.
 IPR009057; Homeodomain-like.
 IPR001005; SANT/Myb.
 IPR017884; SANT_dom.
 IPR007526; SWIRM.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF00249; Myb_DNA-binding
 PF04433; SWIRM 
SMART
 SM00298; CHROMO
 SM00717; SANT 
PROSITE
 PS51293; SANT
 PS50934; SWIRM 
PRINTS