CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-021733
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Selenocysteine-specific elongation factor 
Protein Synonyms/Alias
 Elongation factor sec; Eukaryotic elongation factor, selenocysteine-tRNA-specific; mSelB 
Gene Name
 Eefsec 
Gene Synonyms/Alias
 Selb 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
38ASTAAFDKQPQSRERubiquitination[1]
141IDLLAEGKRQAAIDKubiquitination[1]
254LKVVKKVKSMQMFHTubiquitination[1]
307AALISVEKIPYFRGPacetylation[2, 3]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [2] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [3] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123
Functional Description
 Translation factor necessary for the incorporation of selenocysteine into proteins. It probably replaces EF-Tu for the insertion of selenocysteine directed by the UGA codon. SelB binds GTP and GDP. 
Sequence Annotation
 NP_BIND 14 21 GTP (Potential).
 NP_BIND 78 82 GTP (Potential).
 NP_BIND 132 136 GTP (Potential).
 MOTIF 534 540 Nuclear localization signal (Potential).  
Keyword
 Complete proteome; Cytoplasm; GTP-binding; Nucleotide-binding; Nucleus; Protein biosynthesis; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 583 AA 
Protein Sequence
MAGRRVNVNV GVLGHIDSGK TALARALSTT ASTAAFDKQP QSRERGITLD LGFSCFVVPL 60
PGAEPGSSDT LLQVTLVDCP GHASLIRTII GGAQIIDLMM LVIDVTKGMQ TQSAECLVIG 120
QIACQKLVVV LNKIDLLAEG KRQAAIDKMT KKMQKTLENT KFRGAPIIPV AAKPGGPEAP 180
ETEAPQGISE LIELLKSQIS IPTRDPSGPF LMSVDHCFSI KGQGTVMTGT ILSGTISLGD 240
SVEIPALKVV KKVKSMQMFH TPVTSAMQGD RLGICVTQFD PKLLERGLVC APESLHTVHA 300
ALISVEKIPY FRGPLQTKAK FHITVGHETV MGRTLFFSPA PDSFDLEPVL DSFDLSREYL 360
FQEQYLCKDS MPTATEGDDE ADPKAGHAPG GHCPRQQWAL VEFEKPVTCP RLCLVIGSRL 420
DADIHTNTCR LAFHGVLLQG LEDKNYIESF LPALRVYKLK HKHGLVERVM DDYSVIGRSL 480
FKKETNIQLF VGLKVQLSTG EQGIIDSAFG QSGKFKIHIP GGLSPESKKI LTPTLKKRSR 540
AGRGETTKPE EGTERPEPIQ PVTLNLSFKR YVFDTQKRMV QTP 583 
Gene Ontology
 GO:0005739; C:mitochondrion; IDA:MGI.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0005525; F:GTP binding; IDA:MGI.
 GO:0003924; F:GTPase activity; IEA:InterPro.
 GO:0000049; F:tRNA binding; IDA:MGI.
 GO:0006184; P:GTP catabolic process; IEA:GOC.
 GO:0001514; P:selenocysteine incorporation; IDA:MGI. 
Interpro
 IPR000795; EF_GTP-bd_dom.
 IPR027417; P-loop_NTPase.
 IPR004161; Transl_elong_EFTu/EF1A_2.
 IPR009000; Transl_elong_init/rib_B-barrel. 
Pfam
 PF00009; GTP_EFTU
 PF03144; GTP_EFTU_D2 
SMART
  
PROSITE
 PS00301; EFACTOR_GTP 
PRINTS
 PR00315; ELONGATNFCT.