CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-030696
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial 
Protein Synonyms/Alias
 cDNA FLJ57949, highly similar to NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial (EC 1.6.5.3); cDNA, FLJ79021, highly similar to NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial (EC 1.6.5.3) 
Gene Name
 NDUFV1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
25EGEPGTCKDREILRHubiquitination[1, 2]
36ILRHDPHKLLEGCLVubiquitination[2]
264DRSTDIVKAIARLIEubiquitination[2]
274ARLIEFYKHESCGQCacetylation[3]
274ARLIEFYKHESCGQCubiquitination[2]
293EGVDWMNKVMARFVRubiquitination[2, 4]
Reference
 [1] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Monoclonal antibody cocktail as an enrichment tool for acetylome analysis.
 Shaw PG, Chaerkady R, Zhang Z, Davidson NE, Pandey A.
 Anal Chem. 2011 May 15;83(10):3623-6. [PMID: 21466224]
 [4] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome; Ubiquinone. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 363 AA 
Protein Sequence
MNKPSDGRPK YLVVNADEGE PGTCKDREIL RHDPHKLLEG CLVGGRAMGA RAAYIYIRGE 60
FYNEASNLQV AIREAYEAGL IGKNACGSGY DFDVFVVRGA GAYICGEETA LIESIEGKQG 120
KPRLKPPFPA DVGVFGCPTT VANVETVAVS PTICRRGGTW FAGFGRERNS GTKLFNISGH 180
VNHPCTVEEE MSVPLKELIE KHAGGVTGGW DNLLAVIPGG SSTPLIPKSV CETVLMDFDA 240
LVQAQTGLGT AAVIVMDRST DIVKAIARLI EFYKHESCGQ CTPCREGVDW MNKVMARFVR 300
GDARPAEIDS LWEISKQIEG HTICALGDGA AWPVQGLIRH FRPELEERMQ RFAQQHQARQ 360
AAS 363 
Gene Ontology
 GO:0005743; C:mitochondrial inner membrane; IEA:Compara.
 GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:InterPro.
 GO:0010181; F:FMN binding; IEA:InterPro.
 GO:0008137; F:NADH dehydrogenase (ubiquinone) activity; IEA:InterPro. 
Interpro
 IPR001949; NADH-UbQ_OxRdtase_51kDa_CS.
 IPR019575; NADH-UbQ_OxRdtase_Fsu_4Fe4S-bd.
 IPR011538; NADH_UbQ_OxRdtase_51kDa_su.
 IPR019554; Soluble_ligand-bd. 
Pfam
 PF01512; Complex1_51K
 PF10589; NADH_4Fe-4S
 PF10531; SLBB 
SMART
 SM00928; NADH_4Fe-4S 
PROSITE
 PS00644; COMPLEX1_51K_1
 PS00645; COMPLEX1_51K_2 
PRINTS