CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-013222
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Cysteine sulfinate desulfinase 
Protein Synonyms/Alias
 CSD 
Gene Name
 csdA 
Gene Synonyms/Alias
 ygdJ; b2810; JW2781 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
82LLNAPDDKTIVWTRGacetylation[1]
314LAEDALAKRPGFRSFacetylation[1]
382SFAPYNTKSDVDALVacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine. L-cysteine sulfinic acid is the best substrate. Functions as a selenium delivery protein in the pathway for the biosynthesis of selenophosphate. 
Sequence Annotation
 ACT_SITE 358 358 Probable.
 MOD_RES 222 222 N6-(pyridoxal phosphate)lysine (By  
Keyword
 Complete proteome; Direct protein sequencing; Lyase; Pyridoxal phosphate; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 401 AA 
Protein Sequence
MNVFNPAQFR AQFPALQDAG VYLDSAATAL KPEAVVEATQ QFYSLSAGNV HRSQFAEAQR 60
LTARYEAARE KVAQLLNAPD DKTIVWTRGT TESINMVAQC YARPRLQPGD EIIVSVAEHH 120
ANLVPWLMVA QQTGAKVVKL PLNAQRLPDV DLLPELITPR SRILALGQMS NVTGGCPDLA 180
RAITFAHSAG MVVMVDGAQG AVHFPADVQQ LDIDFYAFSG HKLYGPTGIG VLYGKSELLE 240
AMSPWLGGGK MVHEVSFDGF TTQSAPWKLE AGTPNVAGVI GLSAALEWLA DYDINQAESW 300
SRSLATLAED ALAKRPGFRS FRCQDSSLLA FDFAGVHHSD MVTLLAEYGI ALRAGQHCAQ 360
PLLAELGVTG TLRASFAPYN TKSDVDALVN AVDRALELLV D 401 
Gene Ontology
 GO:0031071; F:cysteine desulfurase activity; IEA:InterPro.
 GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
 GO:0030170; F:pyridoxal phosphate binding; IDA:EcoCyc.
 GO:0016783; F:sulfurtransferase activity; IDA:EcoCyc.
 GO:0016226; P:iron-sulfur cluster assembly; IEA:InterPro.
 GO:0000096; P:sulfur amino acid metabolic process; IDA:EcoCyc. 
Interpro
 IPR000192; Aminotrans_V/Cys_dSase.
 IPR020578; Aminotrans_V_PyrdxlP_BS.
 IPR022471; Cys_desulphurase_CdsA.
 IPR015424; PyrdxlP-dep_Trfase.
 IPR015421; PyrdxlP-dep_Trfase_major_sub1.
 IPR015422; PyrdxlP-dep_Trfase_major_sub2. 
Pfam
 PF00266; Aminotran_5 
SMART
  
PROSITE
 PS00595; AA_TRANSFER_CLASS_5 
PRINTS