CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-044680
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Trafficking protein particle complex subunit 8 
Protein Synonyms/Alias
  
Gene Name
 TRAPPC8 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
888VEFVNVSKCPLTGLKubiquitination[1]
1224EAFSYPQKQEPPEMEubiquitination[1]
1234PPEMELLKFFRPENIubiquitination[2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1381 AA 
Protein Sequence
MRDPNNQLHV IKNLKIAVSN IVTQPPQPGA IRKLLNDVVS GSQPAEGLVA NVITAGDYDL 60
NISATTPWFE SYRETFLQSM PALDHEFLNH YLACMLVASS SEAEPVEQFS KLSQEQHRIQ 120
HNSDYSYPKW FIPNTLKYYV LLHDVSAGDE QRAESIYEEM KQKYGTQGCY LLKINSRTSN 180
RASDEQIPDP WSQYLQKNSI QNQESYEDGP CTITSNKNSD NNLLSLDGLD NEVKDGLPNN 240
FRAHPLQLEQ SSDPSNSIDG PDHLRSASSL HETKKGNTGI IHGACLTLTD HDRIRQFIQE 300
FTFRGLLPHI EKTIRQLNDQ LISRKGLSRS LFSATKKWFS GSKVPEKSIN DLKNTSGLLY 360
PPEAPELQIR KMADLCFLVQ HYDLAYSCYH TAKKDFLNDQ AMLYAAGALE MAAVSAFLQP 420
GAPRPYPAHY MDTAIQTYRD ICKNMVLAER CVLLSAELLK SQSKYSEAAA LLIRLTSEDS 480
DLRSALLLEQ AAHCFINMKS PMVRKYAFHM ILAGHRFSKA GQKKHALRCY CQAMQVYKGK 540
GWSLAEDHIN FTIGRQSYTL RQLDNAVSAF RHILINESKQ SAAQQGAFLR EYLYVYKNVS 600
QLSPDGPLPQ LPLPYINSSA TRVFFGHDRR PADGEKQAAT HVSLDQEYDS ESSQQWRELE 660
EQVVSVVNKG VIPSNFHPTQ YCLNSYSDNS RFPLAVVEEP ITVEVAFRNP LKVLLLLTDL 720
SLLWKFHPKD FSGKDNEEVK QLVTSEPEMI GAEVISEFLI NGEESKVARL KLFPHHIGEL 780
HILGVVYNLG TIQGSMTVDG IGALPGCHTG KYSLSMSVRG KQDLEIQGPR LNNTKEEKTS 840
VKYGPDRRLD PIITEEMPLL EVFFIHFPTG LLCGEIRKAY VEFVNVSKCP LTGLKVVSKR 900
PEFFTFGGNT AVLTPLSPSA SENCSAYKTV VTDATSVCTA LISSASSVDF GIGTGSQPEV 960
IPVPLPDTVL LPGASVQLPM WLRGPDEEGV HEINFLFYYE SVKKQPKIRH RILRHTAIIC 1020
TSRSLNVRAT VCRSNSLENE EGRGGNMLVF VDVENTNTSE AGVKEFHIVQ VSSSSKHWKL 1080
QKSVNLSENK DTKLASREKG KFCFKAIRCE KEEAATQSSE KYTFADIIFG NEQIISSASP 1140
CADFFYRSLS SELKKPQAHL PVHTEKQSTE DAVRLIQKCS EVDLNIVILW KAYVVEDSKQ 1200
LILEGQHHVI LRTIGKEAFS YPQKQEPPEM ELLKFFRPEN ITVSSRPSVE QLSSLIKTSL 1260
HYPESFNHPF HQKSLCLVPV TLLLSNCSKA DVDVIVDLRH KTTSPEALEI HGSFTWLGQT 1320
QYKLQLKSQE IHSLQLKACF VHTGVYNLGT PRVFAKLSDQ VTVFETSQQN SMPALIIISN 1380
V 1381 
Gene Ontology
  
Interpro
 IPR011990; TPR-like_helical.
 IPR024420; TRAPP_III_complex_Trs85. 
Pfam
 PF12739; TRAPPC-Trs85 
SMART
  
PROSITE
  
PRINTS