CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006666
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Probable HTH-type transcriptional regulator LrhA 
Protein Synonyms/Alias
  
Gene Name
 lrhA 
Gene Synonyms/Alias
 genR; b2289; JW2284 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
55RLEQLVGKELFARHGacetylation[1]
127RVSSVYPKLALDVRVacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Not known, does not seem to act on the proton translocating NADH dehydrogenase genes (nuoA-N) which are part of the lrhA operon. 
Sequence Annotation
 DOMAIN 11 68 HTH lysR-type.
 DNA_BIND 28 47 H-T-H motif (Potential).  
Keyword
 Complete proteome; DNA-binding; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 312 AA 
Protein Sequence
MISANRPIIN LDLDLLRTFV AVADLNTFAA AAAAVCRTQS AVSQQMQRLE QLVGKELFAR 60
HGRNKLLTEH GIQLLGYARK ILRFNDEACS SLMFSNLQGV LTIGASDESA DTILPFLLNR 120
VSSVYPKLAL DVRVKRNAYM AEMLESQEVD LMVTTHRPSA FKALNLRTSP THWYCAAEYI 180
LQKGEPIPLV LLDDPSPFRD MVLATLNKAD IPWRLAYVAS TLPAVRAAVK AGLGVTARPV 240
EMMSPDLRVL SGVDGLPPLP DTEYLLCYDP SSNNELAQVI YQAMESYHNP WQYSPMSAPE 300
GDDSLLIERD IE 312 
Gene Ontology
 GO:0043565; F:sequence-specific DNA binding; IDA:EcoliWiki.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
 GO:0006351; P:transcription, DNA-dependent; IDA:EcoCyc. 
Interpro
 IPR005119; LysR_subst-bd.
 IPR000847; Tscrpt_reg_HTH_LysR.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF00126; HTH_1
 PF03466; LysR_substrate 
SMART
  
PROSITE
 PS50931; HTH_LYSR 
PRINTS
 PR00039; HTHLYSR.