CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-024054
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 CUGBP Elav-like family member 2 
Protein Synonyms/Alias
 CELF-2; Bruno-like protein 3; CUG triplet repeat RNA-binding protein 2; CUG-BP2; CUG-BP- and ETR-3-like factor 2; ELAV-type RNA-binding protein 3; ETR-3; mETR-3; Neuroblastoma apoptosis-related RNA-binding protein; mNapor; RNA-binding protein BRUNOL-3 
Gene Name
 Celf2 
Gene Synonyms/Alias
 Cugbp2; Napor 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
75SWSEKELKELFEPYGubiquitination[1]
112FVTFYTRKAALEAQNubiquitination[1]
160FIGMVSKKCNENDIRubiquitination[1]
208AMAQNAIKAMHQSQTubiquitination[1]
476SAKVFIDKQTNLSKCubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 RNA-binding protein implicated in the regulation of several post-transcriptional events. Involved in pre-mRNA alternative splicing, mRNA translation and stability. Mediates exon inclusion and/or exclusion in pre-mRNA that are subject to tissue-specific and developmentally regulated alternative splicing (By similarity). Specifically activates exon 5 inclusion of TNNT2 in embryonic, but not adult, skeletal muscle (By similarity). Activates TNNT2 exon 5 inclusion by antagonizing the repressive effect of PTB (By similarity). Acts as both an activator and repressor of a pair of coregulated exons: promotes inclusion of the smooth muscle (SM) exon but exclusion of the non-muscle (NM) exon in actinin pre-mRNAs (By similarity). Promotes inclusion of exonS 21 and exclusion of exon 5 of the NMDA receptor R1 pre-mRNA (By similarity). Involved in the apoB RNA editing activity (By similarity). Increases COX2 mRNA stability and inhibits COX2 mRNA translation in epithelial cells after radiation injury. Modulates the cellular apoptosis program by regulating COX2-mediated prostaglandin E2 (PGE2) expression. Binds to (CUG)n triplet repeats in the 3'-UTR of transcripts such as DMPK (By similarity). Binds to the muscle-specific splicing enhancer (MSE) intronic sites flanking the TNNT2 alternative exon 5 (By similarity). Binds preferentially to UG-rich sequences, in particular UG repeat and UGUU motifs (By similarity). Binds to apoB mRNA, specifically to AU-rich sequences located immediatly upstream of the edited cytidine (By similarity). Binds AU-rich sequences in the 3'-UTR of COX2 mRNA. Binds to an intronic RNA element responsible for the silencing of exon 21 splicing. Binds to (CUG)n repeats. 
Sequence Annotation
 DOMAIN 40 123 RRM 1.
 DOMAIN 132 212 RRM 2.
 DOMAIN 423 501 RRM 3.
 REGION 1 283 Necessary for RNA-binding, TNNT2 exon 5
 REGION 357 508 Necessary for RNA-binding, TNNT2 exon 5  
Keyword
 Alternative splicing; Complete proteome; Cytoplasm; Direct protein sequencing; mRNA processing; Nucleus; Reference proteome; Repeat; Repressor; RNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 508 AA 
Protein Sequence
MFERTSELAF VETISVESMR CPKSAVTMRN EELLLSNGTA NKMNGALDHS DQPDPDAIKM 60
FVGQIPRSWS EKELKELFEP YGAVYQINVL RDRSQNPPQS KGCCFVTFYT RKAALEAQNA 120
LHNIKTLPGM HHPIQMKPAD SEKSNAVEDR KLFIGMVSKK CNENDIRVMF SPFGQIEECR 180
ILRGPDGLSR GCAFVTFSTR AMAQNAIKAM HQSQTMEGCS SPIVVKFADT QKDKEQRRLQ 240
QQLAQQMQQL NTATWGNLTG LGGLTPQYLA LLQQATSSSN LGAFSGIQQM AGMNALQLQN 300
LATLAAAAAA AQTSATSTNA NPLSSTSSAL GALTSPVAAS TPNSTAGAAM NSLTSLGTLQ 360
GLAGATVGLN NINALAGMAA LNGGLGATGL TNGTAGTMDA LTQAYSGIQQ YAAAALPTLY 420
SQSLLQQQSA AGSQKEGPEG ANLFIYHLPQ EFGDQDILQM FMPFGNVISA KVFIDKQTNL 480
SKCFGFVSYD NPVSAQAAIQ AMNGFQIGMK RLKVQLKRSK NDSKPY 526 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:MGI.
 GO:0005634; C:nucleus; IDA:MGI.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0006376; P:mRNA splice site selection; IDA:MGI. 
Interpro
 IPR002343; Hud_Sxl_RNA.
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom. 
Pfam
 PF00076; RRM_1 
SMART
 SM00360; RRM 
PROSITE
 PS50102; RRM 
PRINTS
 PR00961; HUDSXLRNA.