CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011674
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Serine/arginine-rich splicing factor 5 
Protein Synonyms/Alias
 Delayed-early protein HRS; Insulin-induced growth response protein CL-4; Pre-mRNA-splicing factor SRP40; Splicing factor, arginine/serine-rich 5 
Gene Name
 Srsf5 
Gene Synonyms/Alias
 Cl-4; Hrs; Sfrs5 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
25KDVERFFKGYGRIRDacetylation[1]
36RIRDIDLKRGFGFVEacetylation[1]
163DLKNAIEKLSGKEINacetylation[1]
167AIEKLSGKEINGRKIacetylation[1]
175EINGRKIKLIEGSKRacetylation[1]
181IKLIEGSKRHRSRSRacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
 May be required for progression through G1 and entry into S phase of cell growth. May play a regulatory role in pre- mRNA splicing. Autoregulates its own expression. Plays a role in constitutive splicing and can modulate the selection of alternative splice sites (By similarity). Could play an important role in development and differentiation in the spleen and thymus. 
Sequence Annotation
 DOMAIN 4 74 RRM 1.
 DOMAIN 108 181 RRM 2.
 MOD_RES 167 167 N6-acetyllysine (By similarity).
 MOD_RES 224 224 Phosphoserine (By similarity).
 MOD_RES 226 226 Phosphoserine (By similarity).
 MOD_RES 228 228 Phosphoserine (By similarity).
 MOD_RES 230 230 Phosphoserine (By similarity).
 MOD_RES 245 245 Phosphoserine (By similarity).
 MOD_RES 247 247 Phosphoserine (By similarity).
 MOD_RES 250 250 Phosphoserine (By similarity).
 MOD_RES 260 260 Phosphoserine (By similarity).
 MOD_RES 262 262 Phosphoserine (By similarity).
 MOD_RES 264 264 Phosphoserine (By similarity).
 MOD_RES 267 267 Phosphoserine (By similarity).  
Keyword
 Acetylation; Alternative splicing; Complete proteome; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Repeat; RNA-binding; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 269 AA 
Protein Sequence
MSGCRVFIGR LNPAAREKDV ERFFKGYGRI RDIDLKRGFG FVEFEDPRDA DDAVYELDGK 60
ELCSERVTIE HARARSRGGR GRGRYSDRFS SRRPRNDRRN APPVRTENRL IVENLSSRVS 120
WQDLKDFMRQ AGEVTFADAH RPKLNEGVVE FASYGDLKNA IEKLSGKEIN GRKIKLIEGS 180
KRHRSRSRSR SRTRSSSRSR SRSRSRRSKS YSRSRSRSRS RSKSRSGSRS PVPEKSQKRG 240
SSSRSKSPAS VDRQRSRSRS RSRSVDSGN 269 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:Compara.
 GO:0016607; C:nuclear speck; ISS:UniProtKB.
 GO:0005730; C:nucleolus; IEA:Compara.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
 GO:0051726; P:regulation of cell cycle; IEP:RGD.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom. 
Pfam
 PF00076; RRM_1 
SMART
 SM00360; RRM 
PROSITE
 PS50102; RRM 
PRINTS