CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008992
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 FAD-linked sulfhydryl oxidase ALR 
Protein Synonyms/Alias
 Augmenter of liver regeneration; hERV1; Hepatopoietin 
Gene Name
 GFER 
Gene Synonyms/Alias
 ALR; HERV1; HPO 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
78CRACVDFKTWMRTQQubiquitination[1, 2, 3]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Isoform 1: FAD-dependent sulfhydryl oxidase that regenerates the redox-active disulfide bonds in CHCHD4/MIA40, a chaperone essential for disulfide bond formation and protein folding in the mitochondrial intermembrane space. The reduced form of CHCHD4/MIA40 forms a transient intermolecular disulfide bridge with GFER/ERV1, resulting in regeneration of the essential disulfide bonds in CHCHD4/MIA40, while GFER/ERV1 becomes re- oxidized by donating electrons to cytochrome c or molecular oxygen. 
Sequence Annotation
 DOMAIN 95 195 ERV/ALR sulfhydryl oxidase.
 NP_BIND 99 107 FAD.
 NP_BIND 171 183 FAD.
 NP_BIND 194 195 FAD.
 BINDING 111 111 FAD.
 BINDING 140 140 FAD.
 MOD_RES 59 59 Phosphoserine.
 DISULFID 95 95 Interchain (with C-204).
 DISULFID 142 145 Redox-active.
 DISULFID 171 188
 DISULFID 204 204 Interchain (with C-95).  
Keyword
 3D-structure; Alternative splicing; Cataract; Complete proteome; Cytoplasm; Disease mutation; Disulfide bond; FAD; Flavoprotein; Growth factor; Mitochondrion; Oxidoreductase; Phosphoprotein; Polymorphism; Reference proteome; Secreted. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 205 AA 
Protein Sequence
MAAPGERGRF HGGNLFFLPG GARSEMMDDL ATDARGRGAG RRDAAASAST PAQAPTSDSP 60
VAEDASRRRP CRACVDFKTW MRTQQKRDTK FREDCPPDRE ELGRHSWAVL HTLAAYYPDL 120
PTPEQQQDMA QFIHLFSKFY PCEECAEDLR KRLCRNHPDT RTRACFTQWL CHLHNEVNRK 180
LGKPDFDCSK VDERWRDGWK DGSCD 205 
Gene Ontology
 GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
 GO:0005758; C:mitochondrial intermembrane space; IEA:UniProtKB-SubCell.
 GO:0005739; C:mitochondrion; IDA:HPA.
 GO:0050660; F:flavin adenine dinucleotide binding; IDA:UniProtKB.
 GO:0015035; F:protein disulfide oxidoreductase activity; IDA:UniProtKB.
 GO:0016972; F:thiol oxidase activity; IEA:EC.
 GO:0008283; P:cell proliferation; NAS:UniProtKB.
 GO:0044267; P:cellular protein metabolic process; TAS:Reactome.
 GO:0006626; P:protein targeting to mitochondrion; TAS:Reactome.
 GO:0007283; P:spermatogenesis; NAS:UniProtKB. 
Interpro
 IPR017905; ERV/ALR_sulphydryl_oxidase.
 IPR006863; Evr1_Alr. 
Pfam
 PF04777; Evr1_Alr 
SMART
  
PROSITE
 PS51324; ERV_ALR 
PRINTS