CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005840
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Carbamoyltransferase HypF 
Protein Synonyms/Alias
 Carbamoyl phosphate-converting enzyme HypF; [NiFe]-hydrogenase maturation factor HypF; Hydrogenase maturation protein HypF 
Gene Name
 hypF 
Gene Synonyms/Alias
 hydA; b2712; JW5433 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
248ARKHRPAKPLAVMLPacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. 
Sequence Annotation
 DOMAIN 8 92 Acylphosphatase-like.
 DOMAIN 200 376 YrdC-like.
 ZN_FING 109 134 C4-type (Potential).
 ZN_FING 159 184 C4-type (Potential).
 REGION 19 23 Binds to substrate; phosphate group.  
Keyword
 3D-structure; Complete proteome; Metal-binding; Reference proteome; Transferase; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 750 AA 
Protein Sequence
MAKNTSCGVQ LRIRGKVQGV GFRPFVWQLA QQLNLHGDVC NDGDGVEVRL REDPETFLVQ 60
LYQHCPPLAR IDSVEREPFI WSQLPTEFTI RQSTGGTMNT QIVPDAATCP ACLAEMNTPG 120
ERRYRYPFIN CTHCGPRFTI IRAMPYDRPF TVMAAFPLCP ACDKEYRDPL DRRFHAQPVA 180
CPECGPHLEW VSHGEHAEQE AALQAAIAQL KMGKIVAIKG IGGFHLACDA RNSNAVATLR 240
ARKHRPAKPL AVMLPVADGL PDAARQLLTT PAAPIVLVDK KYVPELCDDI APDLNEVGVM 300
LPANPLQHLL LQELQCPLVM TSGNLSGKPP AISNEQALAD LQGIADGFLI HNRDIVQRMD 360
DSVVRESGEM LRRSRGYVPD ALALPPGFKN VPPVLCLGAD LKNTFCLVRG EQAVLSQHLG 420
DLSDDGIQMQ WREALRLMQN IYDFTPQYVV HDAHPGYVSS QWAREMNLPT QTVLHHHAHA 480
AACLAEHQWP LDGGDVIALT LDGIGMGENG ALWGGECLRV NYRECEHLGG LPAVALPGGD 540
LAAKQPWRNL LAQCLRFVPE WQNYSETASV QQQNWSVLAR AIERGINAPL ASSCGRFFDA 600
VAAALGCAPA TLSYEGEAAC ALEALAASCH GVTHPVTMPR VDNQLDLATF WQQWLNWQAP 660
VNQRAWAFHD ALAQGFAALM REQATMRGIT TLVFSGGVIH NRLLRARLAH YLADFTLLFP 720
QSLPAGDGGL SLGQGVIAAA RWLAGEVQNG 750 
Gene Ontology
 GO:0016743; F:carboxyl- or carbamoyltransferase activity; IDA:EcoCyc.
 GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IDA:EcoCyc.
 GO:0046944; P:protein carbamoylation; IDA:EcoCyc.
 GO:0051604; P:protein maturation; IDA:EcoCyc. 
Interpro
 IPR001792; Acylphosphatase-like.
 IPR017968; Acylphosphatase_CS.
 IPR004421; Carbamoyltransferase_HypF.
 IPR017945; DHBP_synth_RibB-like_a/b_dom.
 IPR006070; YrdC-like_dom.
 IPR011125; Znf_HypF. 
Pfam
 PF00708; Acylphosphatase
 PF01300; Sua5_yciO_yrdC
 PF07503; zf-HYPF 
SMART
  
PROSITE
 PS00150; ACYLPHOSPHATASE_1
 PS00151; ACYLPHOSPHATASE_2
 PS51160; ACYLPHOSPHATASE_3
 PS51163; YRDC 
PRINTS