CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003737
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 40S ribosomal protein S6-B 
Protein Synonyms/Alias
 RP9; S10; YS4 
Gene Name
 RPS6B 
Gene Synonyms/Alias
 RPS102; RPS10A; YBR181C; YBR1244 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
79RIKLLLTKNVSCYRPubiquitination[1]
116LALVIVKKGEQELEGubiquitination[1]
131LTDTTVPKRLGPKRAubiquitination[1]
149RKFFGLSKEDDVRDFubiquitination[1]
214EYAQLLAKRLSERKAubiquitination[1]
Reference
 [1] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047
Functional Description
 Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. 
Sequence Annotation
 MOD_RES 163 163 Phosphothreonine.  
Keyword
 Complete proteome; Cytoplasm; Direct protein sequencing; Nucleus; Phosphoprotein; Reference proteome; Ribonucleoprotein; Ribosomal protein; Ribosome biogenesis; rRNA processing. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 236 AA 
Protein Sequence
MKLNISYPVN GSQKTFEIDD EHRIRVFFDK RIGQEVDGEA VGDEFKGYVF KISGGNDKQG 60
FPMKQGVLLP TRIKLLLTKN VSCYRPRRDG ERKRKSVRGA IVGPDLAVLA LVIVKKGEQE 120
LEGLTDTTVP KRLGPKRANN IRKFFGLSKE DDVRDFVIRR EVTKGEKTYT KAPKIQRLVT 180
PQRLQRKRHQ RALKVRNAQA QREAAAEYAQ LLAKRLSERK AEKAEIRKRR ASSLKA 236 
Gene Ontology
 GO:0022627; C:cytosolic small ribosomal subunit; IDA:SGD.
 GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
 GO:0032040; C:small-subunit processome; IDA:SGD.
 GO:0003735; F:structural constituent of ribosome; IDA:SGD.
 GO:0002181; P:cytoplasmic translation; IC:SGD.
 GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IGI:SGD. 
Interpro
 IPR014401; Ribosomal_S6_euk.
 IPR001377; Ribosomal_S6e.
 IPR018282; Ribosomal_S6e_CS. 
Pfam
 PF01092; Ribosomal_S6e 
SMART
  
PROSITE
 PS00578; RIBOSOMAL_S6E 
PRINTS