CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003577
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ribulose-phosphate 3-epimerase 
Protein Synonyms/Alias
 Pentose-5-phosphate 3-epimerase; PPE; R5P3E 
Gene Name
 rpe 
Gene Synonyms/Alias
 dod; yhfD; b3386; JW3349 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
24RLGEDTAKALAAGADacetylation[1]
72IDVHLMVKPVDRIVPacetylation[1]
210FDQPDYKKVIDEMRSacetylation[1]
221EMRSELAKVSHE***acetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Catalyzes the reversible epimerization of D-ribulose 5- phosphate to D-xylulose 5-phosphate. 
Sequence Annotation
 REGION 144 147 Substrate binding (By similarity).
 REGION 199 200 Substrate binding (By similarity).
 ACT_SITE 36 36 Proton acceptor (By similarity).
 ACT_SITE 177 177 Proton donor (By similarity).
 METAL 34 34 Divalent metal cation (By similarity).
 METAL 36 36 Divalent metal cation (By similarity).
 METAL 68 68 Divalent metal cation (By similarity).
 METAL 177 177 Divalent metal cation (By similarity).
 BINDING 9 9 Substrate (By similarity).
 BINDING 68 68 Substrate (By similarity).
 BINDING 179 179 Substrate; via amide nitrogen (By  
Keyword
 Carbohydrate metabolism; Cobalt; Complete proteome; Iron; Isomerase; Manganese; Metal-binding; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 225 AA 
Protein Sequence
MKQYLIAPSI LSADFARLGE DTAKALAAGA DVVHFDVMDN HYVPNLTIGP MVLKSLRNYG 60
ITAPIDVHLM VKPVDRIVPD FAAAGASIIT FHPEASEHVD RTLQLIKENG CKAGLVFNPA 120
TPLSYLDYVM DKLDVILLMS VNPGFGGQSF IPQTLDKLRE VRRRIDESGF DIRLEVDGGV 180
KVNNIGEIAA AGADMFVAGS AIFDQPDYKK VIDEMRSELA KVSHE 225 
Gene Ontology
 GO:0008198; F:ferrous iron binding; IDA:EcoCyc.
 GO:0004750; F:ribulose-phosphate 3-epimerase activity; IDA:EcoCyc.
 GO:0019323; P:pentose catabolic process; IMP:EcoCyc.
 GO:0009052; P:pentose-phosphate shunt, non-oxidative branch; IGI:EcoCyc. 
Interpro
 IPR013785; Aldolase_TIM.
 IPR026019; Ribul_P_3_epim.
 IPR000056; Ribul_P_3_epim-like.
 IPR011060; RibuloseP-bd_barrel. 
Pfam
 PF00834; Ribul_P_3_epim 
SMART
  
PROSITE
 PS01085; RIBUL_P_3_EPIMER_1
 PS01086; RIBUL_P_3_EPIMER_2 
PRINTS