CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005747
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Transcription initiation factor IIE subunit beta 
Protein Synonyms/Alias
 TFIIE-beta; General transcription factor IIE subunit 2 
Gene Name
 GTF2E2 
Gene Synonyms/Alias
 TF2E2 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
52HGGSSGSKQNSDHSNacetylation[1]
116LDIGLKQKQWLMTEAubiquitination[2]
Reference
 [1] Acetylation of general transcription factors by histone acetyltransferases.
 Imhof A, Yang XJ, Ogryzko VV, Nakatani Y, Wolffe AP, Ge H.
 Curr Biol. 1997 Sep 1;7(9):689-92. [PMID: 9285713]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. 
Sequence Annotation
 DNA_BIND 66 146 TFIIE beta.  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; DNA-binding; Nucleus; Polymorphism; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 291 AA 
Protein Sequence
MDPSLLRERE LFKKRALSTP VVEKRSASSE SSSSSSKKKK TKVEHGGSSG SKQNSDHSNG 60
SFNLKALSGS SGYKFGVLAK IVNYMKTRHQ RGDTHPLTLD EILDETQHLD IGLKQKQWLM 120
TEALVNNPKI EVIDGKYAFK PKYNVRDKKA LLRLLDQHDQ RGLGGILLED IEEALPNSQK 180
AVKALGDQIL FVNRPDKKKI LFFNDKSCQF SVDEEFQKLW RSVTVDSMDE EKIEEYLKRQ 240
GISSMQESGP KKVAPIQRRK KPASQKKRRF KTHNEHLAGV LKDYSDITSS K 291 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:HPA.
 GO:0005654; C:nucleoplasm; TAS:Reactome.
 GO:0005673; C:transcription factor TFIIE complex; IEA:InterPro.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.
 GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.
 GO:0022415; P:viral reproductive process; TAS:Reactome. 
Interpro
 IPR016656; TFIIE-bsu.
 IPR003166; TFIIE_bsu_DNA-bd.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF02186; TFIIE_beta 
SMART
  
PROSITE
 PS51351; TFIIE_BETA_C 
PRINTS