CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-042012
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Syndecan binding protein (Syntenin), isoform CRA_a 
Protein Synonyms/Alias
 Syntenin-1 
Gene Name
 SDCBP 
Gene Synonyms/Alias
 hCG_1787561 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
32YPSLEDLKVDKVIQAubiquitination[1]
35LEDLKVDKVIQAQTAubiquitination[1]
199DKAHKVLKQAFGEKIubiquitination[1]
205LKQAFGEKITMTIRDubiquitination[1, 2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 318 AA 
Protein Sequence
MIKLWTNRDL HIIVMVKNPA KMSLYPSLED LKVDKVIQAQ TAFSANPANP AILSEASAPI 60
PHDGNLYPRL YPELSQYMGL SLNEEEIRAN VAVVSGAPLQ GLVARPSSIN YMVAPVTGND 120
VGIRRAEIKQ GIREVILCKD QDGKIGLRLK SIDNGIFVQL VQANSPASLV GLRFGDQVLQ 180
INGENCAGWS SDKAHKVLKQ AFGEKITMTI RDRPFERTIT MHKDSTGHVG FIFKNGKITS 240
IVKDSSAARN GLLTEHNICE INGQNVIGLK DSQIADILST SGTVVTITIM PAFIFEHIIK 300
RMAPSIMKSL MDHTIPEV 318 
Gene Ontology
  
Interpro
 IPR001478; PDZ. 
Pfam
 PF00595; PDZ 
SMART
 SM00228; PDZ 
PROSITE
 PS50106; PDZ 
PRINTS