UniProt Accession

 B2RZB7_RAT; B2RZB7 

Genbank Protein ID

 AABR06093636; BC167095; CH474073 

Genbank Nucleotide ID

 AAI67095.1; EDL86672.1 

Protein Name

 Protein Snrpd1 

Protein Synonyms/Alias

 Small nuclear ribonucleoprotein D1; Small nuclear ribonucleoprotein D1 (Predicted) 

Gene Name

 Snrpd1 

Gene Synonyms/Alias

 Snrpd1_predicted; rCG_41240 

Created Date

 July 27, 2013 

Organism

 Rattus norvegicus (Rat) 

NCBI Taxa ID

 10116 

Lysine Modification

Position	Peptide	Type	References
41	VSMNTHLKAVKMTLK	acetylation	[1]

Reference

 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 

Functional Description

  

Sequence Annotation

  

Keyword

 Complete proteome; Reference proteome; Ribonucleoprotein; Viral nucleoprotein; Virion. 

Sequence Source

 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 

Protein Length

 119 AA 

Protein Sequence

Gene Ontology

 GO:0071013; C:catalytic step 2 spliceosome; IEA:Compara.
 GO:0005737; C:cytoplasm; IEA:Compara.
 GO:0005689; C:U12-type spliceosomal complex; IEA:Compara.
 GO:0003676; F:nucleic acid binding; IEA:UniProtKB-KW. 

Interpro

 IPR027141; LSm4/Sm_D1/D3.
 IPR010920; LSM_dom.
 IPR001163; Ribonucl_LSM.
 IPR006649; Ribonucl_LSM_euk/arc. 

Pfam

 PF01423; LSM 

SMART

 SM00651; Sm 

PROSITE

  

PRINTS