CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016634
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 3-ketoacyl-CoA thiolase, mitochondrial 
Protein Synonyms/Alias
 Acetyl-CoA acyltransferase; Beta-ketothiolase; Mitochondrial 3-oxoacyl-CoA thiolase 
Gene Name
 Acaa2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
13GVFIVAAKRTPFGAYacetylation[1, 2, 3, 4, 5, 6]
13GVFIVAAKRTPFGAYsuccinylation[5]
25GAYGGLLKDFSATDLacetylation[1, 2, 3, 4, 5, 6, 7]
25GAYGGLLKDFSATDLsuccinylation[5]
45RAALSAGKVPPETIDacetylation[5]
45RAALSAGKVPPETIDsuccinylation[5]
45RAALSAGKVPPETIDubiquitination[8]
137RNVRFGTKFGLDLKLacetylation[1, 2, 3, 4, 5, 6, 7, 9, 10]
137RNVRFGTKFGLDLKLsuccinylation[5]
137RNVRFGTKFGLDLKLubiquitination[8]
143TKFGLDLKLEDTLWAacetylation[1, 3, 4, 5, 10]
143TKFGLDLKLEDTLWAsuccinylation[5]
158GLTDQHVKLPMGMTAacetylation[1, 2, 3, 4, 5, 6, 7]
158GLTDQHVKLPMGMTAsuccinylation[5]
171TAENLAAKYNISREDacetylation[1, 2, 4, 5, 6, 10, 11]
171TAENLAAKYNISREDsuccinylation[5]
171TAENLAAKYNISREDubiquitination[8]
191LQSQQRWKAANEAGYacetylation[1, 2, 4, 5, 6]
191LQSQQRWKAANEAGYsuccinylation[5]
191LQSQQRWKAANEAGYubiquitination[8]
209EMAPIEVKTKKGKQTacetylation[2, 4, 5, 6, 7, 12]
209EMAPIEVKTKKGKQTsuccinylation[5]
209EMAPIEVKTKKGKQTsuccinylation[5]
209EMAPIEVKTKKGKQTsuccinylation[5]
209EMAPIEVKTKKGKQTubiquitination[8]
211APIEVKTKKGKQTMQacetylation[2, 4, 5, 7]
211APIEVKTKKGKQTMQsuccinylation[5]
212PIEVKTKKGKQTMQVacetylation[4, 5]
212PIEVKTKKGKQTMQVsuccinylation[5]
214EVKTKKGKQTMQVDEacetylation[1, 2, 4, 5, 6]
214EVKTKKGKQTMQVDEsuccinylation[5]
234TTLEQLQKLPSVFKKacetylation[1, 2, 3, 4, 5, 6]
234TTLEQLQKLPSVFKKsuccinylation[5]
234TTLEQLQKLPSVFKKubiquitination[8]
240QKLPSVFKKDGTVTAacetylation[2, 5]
240QKLPSVFKKDGTVTAsuccinylation[5]
241KLPSVFKKDGTVTAGacetylation[1, 4, 7]
241KLPSVFKKDGTVTAGubiquitination[8]
269IASEDAVKKHNFTPLacetylation[1, 2, 3, 4, 6, 7]
270ASEDAVKKHNFTPLAacetylation[1, 4, 9, 10]
270ASEDAVKKHNFTPLAubiquitination[8]
305PAINGALKKAGLSLKacetylation[2, 4, 5, 6]
305PAINGALKKAGLSLKsuccinylation[5]
305PAINGALKKAGLSLKubiquitination[8]
312KKAGLSLKDMDLIDVacetylation[1, 4, 5, 6]
312KKAGLSLKDMDLIDVsuccinylation[5]
312KKAGLSLKDMDLIDVubiquitination[8]
332PQFLSVQKALDLDPSacetylation[1]
340ALDLDPSKTNVSGGAacetylation[2, 3, 4, 6, 7]
340ALDLDPSKTNVSGGAubiquitination[8]
375ELRRRGGKYAVGSACacetylation[4]
Reference
 [1] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758]
 [2] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [3] Circadian acetylome reveals regulation of mitochondrial metabolic pathways.
 Masri S, Patel VR, Eckel-Mahan KL, Peleg S, Forne I, Ladurner AG, Baldi P, Imhof A, Sassone-Corsi P.
 Proc Natl Acad Sci U S A. 2013 Feb 26;110(9):3339-44. [PMID: 23341599]
 [4] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753]
 [5] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [6] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654]
 [7] Mitochondrial acetylome analysis in a mouse model of alcohol-induced liver injury utilizing SIRT3 knockout mice.
 Fritz KS, Galligan JJ, Hirschey MD, Verdin E, Petersen DR.
 J Proteome Res. 2012 Mar 2;11(3):1633-43. [PMID: 22309199]
 [8] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [9] Substrate and functional diversity of lysine acetylation revealed by a proteomics survey.
 Kim SC, Sprung R, Chen Y, Xu Y, Ball H, Pei J, Cheng T, Kho Y, Xiao H, Xiao L, Grishin NV, White M, Yang XJ, Zhao Y.
 Mol Cell. 2006 Aug;23(4):607-18. [PMID: 16916647]
 [10] The fasted/fed mouse metabolic acetylome: N6-acetylation differences suggest acetylation coordinates organ-specific fuel switching.
 Yang L, Vaitheesvaran B, Hartil K, Robinson AJ, Hoopmann MR, Eng JK, Kurland IJ, Bruce JE.
 J Proteome Res. 2011 Sep 2;10(9):4134-49. [PMID: 21728379]
 [11] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [12] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377
Functional Description
 Abolishes BNIP3-mediated apoptosis and mitochondrial damage (By similarity). 
Sequence Annotation
 ACT_SITE 92 92 Acyl-thioester intermediate (By
 ACT_SITE 352 352 Proton acceptor (By similarity).
 ACT_SITE 382 382 Proton acceptor (By similarity).
 MOD_RES 119 119 Phosphothreonine (By similarity).
 MOD_RES 121 121 Phosphoserine (By similarity).
 MOD_RES 127 127 Phosphotyrosine (By similarity).
 MOD_RES 137 137 N6-acetyllysine.
 MOD_RES 270 270 N6-acetyllysine.
 MOD_RES 344 344 Phosphoserine.  
Keyword
 Acetylation; Acyltransferase; Complete proteome; Fatty acid metabolism; Lipid metabolism; Mitochondrion; Phosphoprotein; Reference proteome; Transferase; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 397 AA 
Protein Sequence
MALLRGVFIV AAKRTPFGAY GGLLKDFSAT DLTEFAARAA LSAGKVPPET IDSVIVGNVM 60
QSSSDAAYLA RHVGLRVGVP TETGALTLNR LCGSGFQSIV SGCQEICSKD AEVVLCGGTE 120
SMSQSPYCVR NVRFGTKFGL DLKLEDTLWA GLTDQHVKLP MGMTAENLAA KYNISREDCD 180
RYALQSQQRW KAANEAGYFN EEMAPIEVKT KKGKQTMQVD EHARPQTTLE QLQKLPSVFK 240
KDGTVTAGNA SGVSDGAGAV IIASEDAVKK HNFTPLARVV GYFVSGCDPT IMGIGPVPAI 300
NGALKKAGLS LKDMDLIDVN EAFAPQFLSV QKALDLDPSK TNVSGGAIAL GHPLGGSGSR 360
ITAHLVHELR RRGGKYAVGS ACIGGGQGIA LIIQNTA 397 
Gene Ontology
 GO:0005743; C:mitochondrial inner membrane; IDA:MGI.
 GO:0003988; F:acetyl-CoA C-acyltransferase activity; IEA:EC.
 GO:0006631; P:fatty acid metabolic process; IEA:UniProtKB-UniPathway.
 GO:0043066; P:negative regulation of apoptotic process; IEA:Compara.
 GO:1901029; P:negative regulation of mitochondrial outer membrane permeabilization; ISS:UniProtKB. 
Interpro
 IPR002155; Thiolase.
 IPR016039; Thiolase-like.
 IPR016038; Thiolase-like_subgr.
 IPR020615; Thiolase_acyl_enz_int_AS.
 IPR020610; Thiolase_AS.
 IPR020617; Thiolase_C.
 IPR020613; Thiolase_CS.
 IPR020616; Thiolase_N. 
Pfam
 PF02803; Thiolase_C
 PF00108; Thiolase_N 
SMART
  
PROSITE
 PS00098; THIOLASE_1
 PS00737; THIOLASE_2
 PS00099; THIOLASE_3 
PRINTS