CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-041629
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Nuclear pore complex protein Nup50 
Protein Synonyms/Alias
 RCG60197, isoform CRA_a 
Gene Name
 Npap60 
Gene Synonyms/Alias
 rCG_60197 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
8MAKRVAEKELTDRNWacetylation[1]
59SDSGGAFKGFKGLVVacetylation[1]
83FGGGSGGKPLEGLTNacetylation[1]
127GPTTLVDKKISSPKCacetylation[1]
274SASFNFGKKIESSVLacetylation[1]
459EDADELHKILLQKKDacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 467 AA 
Protein Sequence
MAKRVAEKEL TDRNWDEEDE VEEMGTFSVA SEEVMKNRAV KKAKRRNIGF ESDSGGAFKG 60
FKGLVVPSGG GGFSGFGGGS GGKPLEGLTN GNSTDSATPF SSAKTAAEPK AAFGSFAVNG 120
PTTLVDKKIS SPKCNSSNQP PSSGPASSTS CTGNTYHKQL AGLNCSVRDW IVKHVNTNPL 180
CDLTPIFKDY ERYLATIEKQ LENGGSSSSE SQTDRATAAM EPPSLFGSTK LQQDSPFSFH 240
GNKAEDTSEK LEFTAEKKSD AAQGATSASF NFGKKIESSV LGSLSSGSLT GFSFSPGNSS 300
LFGKDAAQSK AASSPFSAKA SESQAGGSSS ECRDGEEEES DEPPKVVVTE VKEEDAFYSK 360
KCKLFYKKDN EFKEKGVGTL HLKPTATQKT QLLVRADTNL GNILLNVLIP PNMPCTRTGK 420
NNVLIVCVPN PPLDEKQPTL PVTMLIRVKT SEDADELHKI LLQKKDV 467 
Gene Ontology
 GO:0005643; C:nuclear pore; IEA:Compara.
 GO:0046907; P:intracellular transport; IEA:InterPro.
 GO:0001841; P:neural tube formation; IEA:Compara. 
Interpro
 IPR015007; NUP2/50/61.
 IPR011993; PH_like_dom.
 IPR000156; Ran_bind_dom. 
Pfam
 PF08911; NUP50
 PF00638; Ran_BP1 
SMART
 SM00160; RanBD 
PROSITE
 PS50196; RANBD1 
PRINTS