CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002723
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Histone H2A.Z 
Protein Synonyms/Alias
 hv1 
Gene Name
 HTA3 
Gene Synonyms/Alias
 HV1; TTHERM_00143660 
Created Date
 July 27, 2013 
Organism
 Tetrahymena thermophila (strain SB210) 
NCBI Taxa ID
 312017 
Lysine Modification
Position
Peptide
Type
References
5***MAGGKGGKGGKGacetylation[1]
8MAGGKGGKGGKGGKGacetylation[1]
11GKGGKGGKGGKGGKVacetylation[1]
14GKGGKGGKGGKVGGAacetylation[1]
17GKGGKGGKVGGAKNKacetylation[1]
22GGKVGGAKNKKTPQSacetylation[1]
Reference
 [1] hv1 is an evolutionarily conserved H2A variant that is preferentially associated with active genes.
 Allis CD, Richman R, Gorovsky MA, Ziegler YS, Touchstone B, Bradley WA, Cook RG.
 J Biol Chem. 1986 Feb 5;261(4):1941-8. [PMID: 3944120
Functional Description
 Variant histone H2A which replaces conventional H2A in a subset of nucleosomes, preferentially in transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. Essential for vegetative growth. 
Sequence Annotation
 MOD_RES 5 5 N6-acetyllysine.
 MOD_RES 8 8 N6-acetyllysine.
 MOD_RES 11 11 N6-acetyllysine.
 MOD_RES 14 14 N6-acetyllysine.
 MOD_RES 17 17 N6-acetyllysine.
 MOD_RES 22 22 N6-acetyllysine.  
Keyword
 Acetylation; Chromosome; Complete proteome; Direct protein sequencing; DNA-binding; Nucleosome core; Nucleus; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 146 AA 
Protein Sequence
MAGGKGGKGG KGGKGGKVGG AKNKKTPQSR SYKAGLQFPV GRIHRFLKGR VSAKNRVGAT 60
AAVYAAAILE YLTAEVLELA GNASKDFKVR RITPRHLLLA IRGDEELDIL IKATIAGGGV 120
IPHIHKALLG KHSTKNRSSA KTAEPR 146 
Gene Ontology
 GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0006334; P:nucleosome assembly; IEA:InterPro. 
Interpro
 IPR009072; Histone-fold.
 IPR007125; Histone_core_D.
 IPR002119; Histone_H2A. 
Pfam
 PF00125; Histone 
SMART
 SM00414; H2A 
PROSITE
 PS00046; HISTONE_H2A 
PRINTS
 PR00620; HISTONEH2A.