CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-015017
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein lin-54 homolog 
Protein Synonyms/Alias
 CXC domain-containing protein 1 
Gene Name
 LIN54 
Gene Synonyms/Alias
 CXCDC1; KIAA2037 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
11VPAEIAKKPRTPTSGubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Component of the DREAM complex, a multiprotein complex that can both act as a transcription activator or repressor depending on the context. In G0 phase, the complex binds to more than 800 promoters and is required for repression of E2F target genes. In S phase, the complex selectively binds to the promoters of G2/M genes whose products are required for mitosis and participates in their cell cycle dependent activation. In the complex, acts as a DNA-binding protein that binds the promoter of CDK1 in a sequence-specific manner. 
Sequence Annotation
 DOMAIN 521 634 CRC.
 MOD_RES 244 244 N6-acetyllysine.
 MOD_RES 249 249 N6-acetyllysine.
 MOD_RES 310 310 Phosphoserine.
 MOD_RES 314 314 Phosphoserine.  
Keyword
 Acetylation; Activator; Alternative splicing; Cell cycle; Complete proteome; DNA-binding; Nucleus; Phosphoprotein; Reference proteome; Repressor; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 749 AA 
Protein Sequence
MEVVPAEIAK KPRTPTSGPV ITKLIFAKPI NSKAVTGQTT QVSPPVIAGR VLSQSTPGTP 60
SKTITISESG VIGSTLNSTT QTPNKIAISP LKSPNKAVKS TVQTITVGGV STSQFKTIIP 120
LATAPNVQQI QVPGSKFHYV RLVTATSASS STQPVSQNPS TNTQPLQQAK PVVVNTTPVR 180
MSVPIVSAQA VKQVVPKPIN PTSQIVTTSQ PQQRLIMPAT PLPQIQPNLT NLPPGTVLAP 240
APGTGNVGYA VLPAQYVTQL QQSSYVSIAS NSTFTGTSGI QTQARLPFNG IIPSESASRP 300
RKPCNCTKSL CLKLYCDCFA NGEFCNNCNC TNCYNNLEHE NERQKAIKAC LDRNPEAFKP 360
KIGKGKEGES DRRHSKGCNC KRSGCLKNYC ECYEAKIMCS SICKCIGCKN FEESPERKTL 420
MHLADAAEVR VQQQTAAKTK LSSQISDLLT RPTPALNSGG GKLPFTFVTK EVAEATCNCL 480
LAQAEQADKK GKSKAAAERM ILEEFGRCLM SVINSAGKAK SDPCAMNC 528 
Gene Ontology
 GO:0005654; C:nucleoplasm; TAS:Reactome.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0000278; P:mitotic cell cycle; TAS:Reactome.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR005172; CRC. 
Pfam
 PF03638; CXC 
SMART
  
PROSITE
 PS51634; CRC 
PRINTS