CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-034931
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein RGD1307235 
Protein Synonyms/Alias
 Similar to RIKEN cDNA 2310035C23 (Predicted) 
Gene Name
 RGD1307235 
Gene Synonyms/Alias
 RGD1307235_predicted; rCG_24062 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
879GKIFTNTKVKPQFQEubiquitination[1]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1218 AA 
Protein Sequence
MAAMAPGGGG SGSGVNPFLS DSDEDDDEVA ATEDQRAGLR LGAGVGLDPG SAGSLSPQDP 60
MALGSSTRPG LPVEASAAPG ALAGSGETPS RLSIDAIAAQ LLRDQYLLTA LELHTELLES 120
GRELPRLRDY FSNPGNFERQ SGTPPGVGAP GIPGASVVGG AGGREPSTTS GGGQLNRAGS 180
ISTLDSLDFA RYSDDGNRET DERVAVLEFE LRKAKETIQA LRANLTKAAE HEVPLQERKN 240
YKSSPEIQEP IKPLEKRALN FLVNEFLLKN NYKLTSITFS DENDDQDFEL WDDVGLNIPK 300
PPDLLQLYRD FGNHQVTGKD LVDVASGVDE DELEPLTPVL GNIPPTLDTP LPIENSLLVQ 360
KLEDKISLLN NEKWSLMEQI RRLESEMDIL KTEHFTTPAV GDSVQPSLAW PSPKDSEDSK 420
QSPVVNSSDQ DIQKAKDVHL EIPDGADSFI PKEKSSDSFP TKEREELPPS SVSSKATLHF 480
DQPNRKLSPA FHQALLSFCR MSADSRLGSE VSRIADSEKS VMLMLGRCLP HIVPNVLLAK 540
REELIPLILC TACLHPEPKE RDQLLHILFN LIKRPDDEQR QMILTGCVAF ARHVGPTRVE 600
AELLPQCWEQ INHKYPERRL LVAESCGALA PYLPKEIRSS LVLSMLQQML MEDKADLVRE 660
AVIKSLGIIM GYIDDPDKYQ QGFELLLSAL GDPSERVVSA THQVFLPAYA AWTTELGNLQ 720
SHLIPTLLSK IEKLLRDGEH GLDEHKLHMY LSALQSLIPS LFALVLQNAP FSSKAKLHGE 780
VPHIEVTRFP RPMSPLQDVS TIIGSREQLA VLLQLYDYQL EHEGTTGWES LLWVVNQLLP 840
QLIEIVGKIN VTSTACVHEF SRFFWRLCRT FGKIFTNTKV KPQFQEILRL SEENIDSSAG 900
NGVLTKATVP IYATGVLTCY IQEEDRKLLV GFLEDVMTLL SLSHAPLDSL KASFVELGAN 960
PAYHELLLTV LWYGVVHTSA LVRCTAARMF ELLVKGVNET LVAQRVVPAL ITLSSDPEIS 1020
VRIATIPAFG TIMETVIQRE LLERVKMQLA SFLEDPQYQD QHSLHTEVIR TFGRVGPNAE 1080
PRFRDEFVIP HLHKLALVNN LQIVDSKRLD IATHLFEAYS ALSCCFISED LMVNHFLPGL 1140
RCLRTDMEHL SPEHEVILSS MIKECEQKVE NKTVQEPPGS MSIAASLVSE DTKTKFLNKM 1200
GQLTTSGAML ANVFQRKK 1218 
Gene Ontology
  
Interpro
 IPR011989; ARM-like.
 IPR016024; ARM-type_fold.
 IPR021133; HEAT_type_2.
 IPR006594; LisH_dimerisation. 
Pfam
  
SMART
 SM00667; LisH 
PROSITE
 PS50077; HEAT_REPEAT
 PS50896; LISH 
PRINTS