CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-010276
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Aminopeptidase YpdF 
Protein Synonyms/Alias
  
Gene Name
 ypdF 
Gene Synonyms/Alias
 b2385; JW2382 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
178MRQQGAEKASFDTIVacetylation[1]
Reference
 [1] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111
Functional Description
 Hydrolyzes the N-terminal methionine when the next amino acid is alanine, proline or serine. The substrate preference for methionyl aminopeptidase activity is Pro > Ala > Ser. Also able to hydrolyze the Xaa-Pro peptide bond when the first amino acid is alanine, asparagine or methionine. 
Sequence Annotation
  
Keyword
 Aminopeptidase; Complete proteome; Hydrolase; Protease; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 361 AA 
Protein Sequence
MTLLASLRDW LKAQQLDAVL LSSRQNKQPH LGISTGSGYV VISRESAHIL VDSRYYVEVE 60
ARAQGYQLHL LDATNTLTTI VNQIIADEQL QTLGFEGQQV SWETAHRWQS ELNAKLVSAT 120
PDVLRQIKTP EEVEKIRLAC GIADRGAEHI RRFIQAGMSE REIAAELEWF MRQQGAEKAS 180
FDTIVASGWR GALPHGKASD KIVAAGEFVT LDFGALYQGY CSDMTRTLLV NGEGVSAESH 240
LLFNVYQIVL QAQLAAISAI RPGVRCQQVD DAARRVITEA GYGDYFGHNT GHAIGIEVHE 300
DPRFSPRDTT TLQPGMLLTV EPGIYLPGQG GVRIEDVVLV TPQGAEVLYA MPKTVLLTGE 360
A 361 
Gene Ontology
 GO:0004177; F:aminopeptidase activity; IDA:EcoCyc.
 GO:0008235; F:metalloexopeptidase activity; IEA:InterPro.
 GO:0009987; P:cellular process; IEA:InterPro.
 GO:0006508; P:proteolysis; IDA:EcoCyc. 
Interpro
 IPR000587; Creatinase.
 IPR001714; Pept_M24_MAP.
 IPR000994; Pept_M24_structural-domain. 
Pfam
 PF01321; Creatinase_N
 PF00557; Peptidase_M24 
SMART
  
PROSITE
  
PRINTS
 PR00599; MAPEPTIDASE.