CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035010
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein LOC680385 
Protein Synonyms/Alias
  
Gene Name
 LOC680385 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
204KQSKVEAKLKAKQEHacetylation[1]
327DQQESLNKWKSKGGHacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 402 AA 
Protein Sequence
MAENGDNEKM AALEAKICHQ IEYYFGDFNL PQDKFLKEQI KLDEGWVSLE TMIKFNRLNR 60
LTTDFNVIVQ ALSKSKAKLM EVSADKTKIR RSPSRPLPEV MDEYKNDVKN RSVYIKGFPT 120
DATLDDIKEW LDDKGQILNI QMRRKLHKTF KGSIFAVFDS IQSAKKFVDT PGQKYKDTNL 180
LILFKEDYFA KKNEERKQSK VEAKLKAKQE HEGRHKPGST ETRALEGKMG CLLKFSGDLD 240
DQTCREDLHF LFSNHGEIKW IDFVRGAKEG IILFKEKAKD TLEKARSANN GNLLLRNKKM 300
TWKVLEGHAE KDAMKKITDD QQESLNKWKS KGGHVRRFKG RGKGNRPAYA GAPKGRGQFQ 360
GRRTRFDDDD HRRGPMKRGR DGRDREEPAS EHKKRENGAR DK 402 
Gene Ontology
 GO:0005634; C:nucleus; IEA:InterPro.
 GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:InterPro.
 GO:0006396; P:RNA processing; IEA:InterPro. 
Interpro
 IPR002344; Lupus_La.
 IPR006630; Lupus_La_RNA-bd.
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR014886; RRM_3.
 IPR000504; RRM_dom.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF05383; La
 PF00076; RRM_1
 PF08777; RRM_3 
SMART
 SM00715; LA
 SM00360; RRM 
PROSITE
 PS50961; HTH_LA
 PS50102; RRM 
PRINTS
 PR00302; LUPUSLA.