CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002534
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ribonucleoside-diphosphate reductase large subunit 
Protein Synonyms/Alias
 Ribonucleoside-diphosphate reductase subunit M1; Ribonucleotide reductase large subunit 
Gene Name
 Rrm1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
471EKLAEVTKVIVRNLNacetylation[1]
Reference
 [1] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441
Functional Description
 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. 
Sequence Annotation
 DOMAIN 1 92 ATP-cone.
 REGION 11 17 Allosteric activator binding (By
 REGION 217 218 Substrate binding (By similarity).
 REGION 285 288 Allosteric effector binding, determines
 REGION 427 431 Substrate binding (By similarity).
 REGION 603 607 Substrate binding (By similarity).
 ACT_SITE 427 427 Proton acceptor (By similarity).
 ACT_SITE 429 429 Cysteine radical intermediate (By
 ACT_SITE 431 431 Proton acceptor (By similarity).
 BINDING 5 5 Allosteric activator (By similarity).
 BINDING 53 53 Allosteric activator (By similarity).
 BINDING 88 88 Allosteric activator (By similarity).
 BINDING 247 247 Substrate; via amide nitrogen (By
 MOD_RES 17 17 N6-acetyllysine (By similarity).
 MOD_RES 376 376 N6-acetyllysine (By similarity).
 DISULFID 218 444 Redox-active (By similarity).  
Keyword
 Acetylation; Allosteric enzyme; ATP-binding; Complete proteome; Cytoplasm; Disulfide bond; DNA replication; Nucleotide-binding; Oxidoreductase; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 792 AA 
Protein Sequence
MHVIKRDGRQ ERVMFDKITS RIQKLCYGLN MDFVDPAQIT MKVIQGLYSG VTTVELDTLA 60
AETAATLTTK HPDYAILAAR IAVSNLHKET KKVFSDVMED LYNYINPHNG RHSPMVASST 120
LDIVMANKDR LNSAIIYDRD FSYNYFGFKT LERSYLLKIN GKVAERPQHM LMRVSVGIHK 180
EDIDAAIETY NLLSEKWFTH ASPTLFNAGT NRPQLSSCFL LSMKDDSIEG IYDTLKQCAL 240
ISKSAGGIGV AVSCIRATGS YIAGTNGNSN GLVPMLRVYN NTARYVDQGG NKRPGAFAIY 300
LEPWHLDIFE FLDLKKNTGK EEQRARDLFF ALWIPDLFMK RVETNQDWSL MCPNECPGLD 360
EVWGEEFEKL YESYEKQGRV RKVVKAQQLW YAIIESQTET GTPYMLYKDS CNRKSNQQNL 420
GTIKCSNLCT EIVEYTSKDE VAVCNLASLA LNMYVTPEHT YDFEKLAEVT KVIVRNLNKI 480
IDINYYPIPE AHLSNKRHRP IGIGVQGLAD AFILMRYPFE SPEAQLLNKQ IFETIYYGAL 540
EASCELAKEY GPYETYEGSP VSKGILQYDM WNVAPTDLWD WKPLKEKIAK YGIRNSLLIA 600
PMPTASTAQI LGNNESIEPY TSNIYTRRVL SGEFQIVNPH LLKDLTERGL WNEEMKNQII 660
ACNGSIQSIP EIPDDLKQLY KTVWEISQKT VLKMAAERGA FIDQSQSLNI HIAEPNYGKL 720
TSMHFYGWKQ GLKTGMYYLR TRPAANPIQF TLNKEKLKDK EKALKEEEEK ERNTAAMVCS 780
LENREECLMC GS 792 
Gene Ontology
 GO:0005971; C:ribonucleoside-diphosphate reductase complex; IEA:InterPro.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0017076; F:purine nucleotide binding; IDA:MGI.
 GO:0004748; F:ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor; IDA:UniProtKB.
 GO:0009263; P:deoxyribonucleotide biosynthetic process; IDA:UniProtKB.
 GO:0006260; P:DNA replication; IEA:UniProtKB-UniPathway.
 GO:0051290; P:protein heterotetramerization; IPI:UniProtKB. 
Interpro
 IPR005144; ATP-cone.
 IPR013346; NrdE_NrdA.
 IPR000788; RNR_lg_C.
 IPR013509; RNR_lsu_N.
 IPR008926; RNR_R1-su_N. 
Pfam
 PF03477; ATP-cone
 PF02867; Ribonuc_red_lgC
 PF00317; Ribonuc_red_lgN 
SMART
  
PROSITE
 PS51161; ATP_CONE
 PS00089; RIBORED_LARGE 
PRINTS
 PR01183; RIBORDTASEM1.