CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-007406
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Synaptotagmin-3 
Protein Synonyms/Alias
 Synaptotagmin III; SytIII 
Gene Name
 Syt3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
273AKLIGQIKPELYQGTubiquitination[1]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113
Functional Description
 May be involved in Ca(2+)-dependent exocytosis of secretory vesicles through Ca(2+) and phospholipid binding to the C2 domain or may serve as Ca(2+) sensors in the process of vesicular trafficking and exocytosis. 
Sequence Annotation
 DOMAIN 299 400 C2 1.
 DOMAIN 431 534 C2 2.
 METAL 328 328 Calcium 1 (By similarity).
 METAL 328 328 Calcium 2 (By similarity).
 METAL 334 334 Calcium 1 (By similarity).
 METAL 386 386 Calcium 1 (By similarity).
 METAL 386 386 Calcium 2 (By similarity).
 METAL 387 387 Calcium 1; via carbonyl oxygen (By
 METAL 388 388 Calcium 1 (By similarity).
 METAL 388 388 Calcium 2 (By similarity).
 METAL 388 388 Calcium 3 (By similarity).
 METAL 391 391 Calcium 3 (By similarity).
 METAL 394 394 Calcium 2 (By similarity).
 METAL 394 394 Calcium 3 (By similarity).  
Keyword
 3D-structure; Calcium; Cell junction; Complete proteome; Cytoplasmic vesicle; Membrane; Metal-binding; Reference proteome; Repeat; Synapse; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 588 AA 
Protein Sequence
MSGDYEDDLC RRALILVSDL CARIRDADTN DRCQEFNELR IRGYPRGPDA DISVSLLSVI 60
VTFCGIVLLG VSLFVSWKLC WVPWRDKGGS AVGGGPLRKD LAPGVGLAGL VGGGGHHLGA 120
SLGGHPLLGG PHHHAHPAHH PPFAELLEPG GLGGSEPPEP SYLDMDSYPE AAVASVVAAG 180
VKPSQTSPEL PSEGGTGSGL LLLPPSGGGL PSAQSHQQVT SLAPTTRYPA LPRPLTQQTL 240
TTQADPSSEE RPPALPLPLP GGEEKAKLIG QIKPELYQGT GPGGRRTGGG SGEAGAPCGR 300
ISFALRYLYG SDQLVVRILQ ALDLPAKDSN GFSDPYVKIY LLPDRKKKFQ TKVHRKTLNP 360
IFNETFQFSV PLAELAQRKL HFSVYDFDRF SRHDLIGQVV LDNLLELAEQ PPDRPLWRDI 420
LEGGSEKADL GELNFSLCYL PTAGLLTVTI IKASNLKAMD LTGFSDPYVK ASLISEGRRL 480
KKRKTSIKKN TLNPTYNEAL VFDVAPESVE NVGLSIAVVD YDCIGHNEVI GVCRVGPEAA 540
DPHGREHWAE MLANPRKPVE HWHQLVEEKT LSSFTKGGKG LSEKENSE 588 
Gene Ontology
 GO:0030054; C:cell junction; IEA:UniProtKB-KW.
 GO:0005768; C:endosome; IEA:Compara.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0045202; C:synapse; NAS:RGD.
 GO:0030672; C:synaptic vesicle membrane; IEA:UniProtKB-SubCell.
 GO:0005509; F:calcium ion binding; TAS:RGD.
 GO:0005544; F:calcium-dependent phospholipid binding; IDA:RGD.
 GO:0030276; F:clathrin binding; IDA:BHF-UCL.
 GO:0001786; F:phosphatidylserine binding; IDA:RGD.
 GO:0019905; F:syntaxin binding; IDA:RGD.
 GO:0005215; F:transporter activity; IEA:InterPro.
 GO:0017156; P:calcium ion-dependent exocytosis; TAS:RGD.
 GO:0031340; P:positive regulation of vesicle fusion; IDA:RGD.
 GO:0051592; P:response to calcium ion; IDA:RGD.
 GO:0016079; P:synaptic vesicle exocytosis; TAS:RGD. 
Interpro
 IPR000008; C2_Ca-dep.
 IPR008973; C2_Ca/lipid-bd_dom_CaLB.
 IPR020477; C2_dom.
 IPR018029; C2_membr_targeting.
 IPR001565; Synaptotagmin. 
Pfam
 PF00168; C2 
SMART
 SM00239; C2 
PROSITE
 PS50004; C2 
PRINTS
 PR00360; C2DOMAIN.
 PR00399; SYNAPTOTAGMN.