CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005464
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Transcriptional regulatory protein ZraR 
Protein Synonyms/Alias
  
Gene Name
 zraR 
Gene Synonyms/Alias
 hydG; STM4174; STMF1.27 
Created Date
 July 27, 2013 
Organism
 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) 
NCBI Taxa ID
 99287 
Lysine Modification
Position
Peptide
Type
References
416VILAALEKTGGNKTEacetylation[1]
421LEKTGGNKTEAARQLacetylation[1]
433RQLGITRKTLLAKLSacetylation[1]
Reference
 [1] Regulation of cellular metabolism by protein lysine acetylation.
 Zhao S, Xu W, Jiang W, Yu W, Lin Y, Zhang T, Yao J, Zhou L, Zeng Y, Li H, Li Y, Shi J, An W, Hancock SM, He F, Qin L, Chin J, Yang P, Chen X, Lei Q, Xiong Y, Guan KL.
 Science. 2010 Feb 19;327(5968):1000-4. [PMID: 20167786
Functional Description
 Member of the two-component regulatory system ZraS/ZraR. When activated by ZraS it acts in conjunction with sigma-54 to regulate the expression of zraP. Positively autoregulates the expression of the zraSR operon (By similarity). 
Sequence Annotation
 DOMAIN 7 121 Response regulatory.
 DOMAIN 141 370 Sigma-54 factor interaction.
 NP_BIND 169 176 ATP (Potential).
 NP_BIND 232 241 ATP (Potential).
 DNA_BIND 421 440 H-T-H motif (By similarity).
 MOD_RES 56 56 4-aspartylphosphate (By similarity).  
Keyword
 3D-structure; Activator; ATP-binding; Complete proteome; Cytoplasm; DNA-binding; Nucleotide-binding; Phosphoprotein; Reference proteome; Transcription; Transcription regulation; Two-component regulatory system. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 441 AA 
Protein Sequence
MIRGKIDILV VDDDVSHCTI LQALLRGWGY NVALAYSGHD ALAQVREKVF DLVLCDVRMA 60
EMDGIATLKE IKALNPAIPI LIMTAFSSVE TAVEALKAGA LDYLIKPLDF DRLQETLEKA 120
LAHTRETGAE LPSASAAQFG MIGSSPAMQH LLNEIAMVAP SDATVLIHGD SGTGKELVAR 180
ALHACSARSD RPLVTLNCAA LNESLLESEL FGHEKGAFTG ADKRREGRFV EADGGTLFLD 240
EIGDISPLMQ VRLLRAIQER EVQRVGSNQT ISVDVRLIAA THRDLAEEVS AGRFRQDLYY 300
RLNVVAIEMP SLRQRREDIP LLADHFLRRF AERNRKVVKG FTPQAMDLLI HYDWPGNIRE 360
LENAIERAVV LLTGEYISER ELPLAIAATP IKTEYSGEIQ PLVDVEKEVI LAALEKTGGN 420
KTEAARQLGI TRKTLLAKLS R 441 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
 GO:0000156; F:phosphorelay response regulator activity; IEA:InterPro.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
 GO:0035556; P:intracellular signal transduction; IEA:GOC.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR003593; AAA+_ATPase.
 IPR011006; CheY-like_superfamily.
 IPR009057; Homeodomain-like.
 IPR002197; HTH_Fis.
 IPR027417; P-loop_NTPase.
 IPR001789; Sig_transdc_resp-reg_receiver.
 IPR002078; Sigma_54_int.
 IPR025662; Sigma_54_int_dom_ATP-bd_1.
 IPR025943; Sigma_54_int_dom_ATP-bd_2.
 IPR025944; Sigma_54_int_dom_CS. 
Pfam
 PF02954; HTH_8
 PF00072; Response_reg
 PF00158; Sigma54_activat 
SMART
 SM00382; AAA
 SM00448; REC 
PROSITE
 PS50110; RESPONSE_REGULATORY
 PS00675; SIGMA54_INTERACT_1
 PS00676; SIGMA54_INTERACT_2
 PS00688; SIGMA54_INTERACT_3
 PS50045; SIGMA54_INTERACT_4 
PRINTS
 PR01590; HTHFIS.