CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-001543
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Netrin receptor UNC5C 
Protein Synonyms/Alias
 Protein unc-5 homolog 3; Protein unc-5 homolog C 
Gene Name
 UNC5C 
Gene Synonyms/Alias
 UNC5H3 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
448GFQPVNIKAARQDLLubiquitination[1]
481ALHDVSDKIPMTNSPubiquitination[1]
497LDPLPNLKIKVYNTSubiquitination[1]
519DLSEFTSKLSPQMTQubiquitination[1]
537ENEALSLKNQSLARQubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Receptor for netrin required for axon guidance. Mediates axon repulsion of neuronal growth cones in the developing nervous system upon ligand binding. Axon repulsion in growth cones may be caused by its association with DCC that may trigger signaling for repulsion. Also involved in corticospinal tract axon guidances independently of DCC. It also acts as a dependence receptor required for apoptosis induction when not associated with netrin ligand (By similarity). 
Sequence Annotation
 DOMAIN 62 159 Ig-like.
 DOMAIN 161 256 Ig-like C2-type.
 DOMAIN 260 314 TSP type-1 1.
 DOMAIN 316 368 TSP type-1 2.
 DOMAIN 528 634 ZU5.
 DOMAIN 850 929 Death.
 REGION 694 712 Interaction with DCC (By similarity).
 MOD_RES 568 568 Phosphotyrosine (By similarity).
 CARBOHYD 236 236 N-linked (GlcNAc...) (Potential).
 CARBOHYD 361 361 N-linked (GlcNAc...) (Potential).
 DISULFID 83 142 By similarity.
 DISULFID 188 239 By similarity.
 DISULFID 272 309 By similarity.
 DISULFID 276 313 By similarity.
 DISULFID 287 299 By similarity.  
Keyword
 Alternative splicing; Apoptosis; Complete proteome; Developmental protein; Disulfide bond; Glycoprotein; Immunoglobulin domain; Membrane; Phosphoprotein; Polymorphism; Receptor; Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 931 AA 
Protein Sequence
MRKGLRATAA RCGLGLGYLL QMLVLPALAL LSASGTGSAA QDDDFFHELP ETFPSDPPEP 60
LPHFLIEPEE AYIVKNKPVN LYCKASPATQ IYFKCNSEWV HQKDHIVDER VDETSGLIVR 120
EVSIEISRQQ VEELFGPEDY WCQCVAWSSA GTTKSRKAYV RIAYLRKTFE QEPLGKEVSL 180
EQEVLLQCRP PEGIPVAEVE WLKNEDIIDP VEDRNFYITI DHNLIIKQAR LSDTANYTCV 240
AKNIVAKRKS TTATVIVYVN GGWSTWTEWS VCNSRCGRGY QKRTRTCTNP APLNGGAFCE 300
GQSVQKIACT TLCPVDGRWT PWSKWSTCGT ECTHWRRREC TAPAPKNGGK DCDGLVLQSK 360
NCTDGLCMQS FIYPISTEQR TQNEYGFSSA PDSDDVALYV GIVIAVIVCL AISVVVALFV 420
YRKNHRDFES DIIDSSALNG GFQPVNIKAA RQDLLAVPPD LTSAAAMYRG PVYALHDVSD 480
KIPMTNSPIL DPLPNLKIKV YNTSGAVTPQ DDLSEFTSKL SPQMTQSLLE NEALSLKNQS 540
LARQTDPSCT AFGSFNSLGG HLIVPNSGVS LLIPAGAIPQ GRVYEMYVTV HRKETMR 597 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005886; C:plasma membrane; IEA:Compara.
 GO:0005042; F:netrin receptor activity; TAS:ProtInc.
 GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
 GO:0007411; P:axon guidance; TAS:Reactome.
 GO:0007420; P:brain development; TAS:ProtInc.
 GO:0043065; P:positive regulation of apoptotic process; IEA:Compara.
 GO:0030334; P:regulation of cell migration; IEA:Compara. 
Interpro
 IPR011029; DEATH-like_dom.
 IPR000488; Death_domain.
 IPR007110; Ig-like_dom.
 IPR013783; Ig-like_fold.
 IPR013098; Ig_I-set.
 IPR003598; Ig_sub2.
 IPR000884; Thrombospondin_1_rpt.
 IPR000906; ZU5. 
Pfam
 PF00531; Death
 PF07679; I-set
 PF00090; TSP_1
 PF00791; ZU5 
SMART
 SM00005; DEATH
 SM00408; IGc2
 SM00209; TSP1
 SM00218; ZU5 
PROSITE
 PS50017; DEATH_DOMAIN
 PS50835; IG_LIKE
 PS50092; TSP1
 PS51145; ZU5 
PRINTS