CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-020721
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Probable dimethyladenosine transferase 
Protein Synonyms/Alias
 DIM1 dimethyladenosine transferase 1 homolog; DIM1 dimethyladenosine transferase 1-like; Probable 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase; Probable 18S rRNA dimethylase; Probable S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase 
Gene Name
 Dimt1 
Gene Synonyms/Alias
 Dimt1l 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
253AVQQLLEKNYRIHCSubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA in the 40S particle (By similarity). 
Sequence Annotation
 BINDING 37 37 S-adenosyl-L-methionine; via carbonyl
 BINDING 39 39 S-adenosyl-L-methionine; via amide
 BINDING 64 64 S-adenosyl-L-methionine; via carbonyl
 BINDING 85 85 S-adenosyl-L-methionine (By similarity).
 BINDING 113 113 S-adenosyl-L-methionine (By similarity).
 BINDING 128 128 S-adenosyl-L-methionine (By similarity).  
Keyword
 Complete proteome; Methyltransferase; Nucleus; Reference proteome; RNA-binding; rRNA processing; S-adenosyl-L-methionine; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 313 AA 
Protein Sequence
MPKAKSAASS RRRDRQEQRR ELKRAGGLMF NTGIGQHILK NPLIVNSIID KAALRPTDVV 60
LEVGPGTGNM TVKLLEKAKK VVACELDPRL VAELHKRVQG TPLASKLQVL VGDVLKSDLP 120
FFDACVANLP YQISSPFVFK LLLHRPFFRC AILMFQREFA LRLVAKPGDK LYCRLSINTQ 180
LLARVDHLMK VGKNNFRPPP KVESSVVRIE PKNPPPPINF QEWDGLVRIT FVRKNKTLSA 240
AFKSSAVQQL LEKNYRIHCS VQNTVIPEDF SIADKIQQIL TSTGFSDKRA RSMDIDDFIR 300
LLHGFNAEGI HFS 313 
Gene Ontology
 GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
 GO:0052909; F:18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity; IEA:EC.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:InterPro.
 GO:0031167; P:rRNA methylation; IEA:GOC. 
Interpro
 IPR025814; DIM1.
 IPR020596; rRNA_Ade_Mease_Trfase_CS.
 IPR001737; rRNA_Ade_methylase_transferase.
 IPR020598; rRNA_Ade_methylase_Trfase_N.
 IPR011530; rRNA_adenine_dimethylase. 
Pfam
 PF00398; RrnaAD 
SMART
 SM00650; rADc 
PROSITE
 PS01131; RRNA_A_DIMETH 
PRINTS