CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006665
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Recombination-associated protein RdgC 
Protein Synonyms/Alias
  
Gene Name
 rdgC 
Gene Synonyms/Alias
 yaiD; b0393; JW0384 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
25LRAEEMEKQLASMAFacetylation[1]
87IKQALEAKIAKLEAEacetylation[1]
90ALEAKIAKLEAEQARacetylation[1, 2]
104RKLKKTEKDSLKDEVacetylation[1]
108KTEKDSLKDEVLHSLacetylation[1]
146VDCASAKKAEDTLALacetylation[1]
231EAGKVVTKLALDWQQacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111
Functional Description
 May be involved in recombination. 
Sequence Annotation
  
Keyword
 3D-structure; Complete proteome; Cytoplasm; Direct protein sequencing; DNA recombination; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 303 AA 
Protein Sequence
MLWFKNLMVY RLSREISLRA EEMEKQLASM AFTPCGSQDM AKMGWVPPMG SHSDALTHVA 60
NGQIVICARK EEKILPSPVI KQALEAKIAK LEAEQARKLK KTEKDSLKDE VLHSLLPRAF 120
SRFSQTMMWI DTVNGLIMVD CASAKKAEDT LALLRKSLGS LPVVPLSMEN PIELTLTEWV 180
RSGSAAQGFQ LLDEAELKSL LEDGGVIRAK KQDLTSEEIT NHIEAGKVVT KLALDWQQRI 240
QFVMCDDGSL KRLKFCDELR DQNEDIDRED FAQRFDADFI LMTGELAALI QNLIEGLGGE 300
AQR 303 
Gene Ontology
 GO:0043590; C:bacterial nucleoid; IDA:EcoCyc.
 GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
 GO:0003690; F:double-stranded DNA binding; IDA:EcoCyc.
 GO:0003697; F:single-stranded DNA binding; IDA:EcoCyc.
 GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
 GO:0000018; P:regulation of DNA recombination; IDA:EcoCyc. 
Interpro
 IPR007476; RdgC. 
Pfam
 PF04381; RdgC 
SMART
  
PROSITE
  
PRINTS