CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012452
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein 
Protein Synonyms/Alias
 Methyl methanesulfonate (MMF)-inducible fragment protein 1 
Gene Name
 HERPUD1 
Gene Synonyms/Alias
 HERP; KIAA0025; MIF1 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
99KMPEINAKVAESTEEubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Component of the endoplasmic reticulum quality control (ERQC) system also called ER-associated degradation (ERAD) involved in ubiquitin-dependent degradation of misfolded endoplasmic reticulum proteins. Could enhance presenilin-mediated beta-amyloid protein 40 generation. 
Sequence Annotation
 DOMAIN 10 72 Ubiquitin-like.  
Keyword
 3D-structure; Alternative splicing; Complete proteome; Endoplasmic reticulum; Membrane; Polymorphism; Reference proteome; Transmembrane; Transmembrane helix; Unfolded protein response. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 391 AA 
Protein Sequence
MESETEPEPV TLLVKSPNQR HRDLELSGDR GWSVGHLKAH LSRVYPERPR PEDQRLIYSG 60
KLLLDHQCLR DLLPKEKRHV LHLVCNVKSP SKMPEINAKV AESTEEPAGS NRGQYPEDSS 120
SDGLRQREVL RNLSSPGWEN ISRPEAAQQA FQGLGPGFSG YTPYGWLQLS WFQQIYARQY 180
YMQYLAATAA SGAFVPPPSA QEIPVVSAPA PAPIHNQFPA ENQPANQNAA PQVVVNPGAN 240
QNLRMNAQGG PIVEEDDEIN RDWLDWTYSA ATFSVFLSIL YFYSSLSRFL MVMGATVVMY 300
LHHVGWFPFR PRPVQNFPND GPPPDVVNQD PNNNLQEGTD PETEDPNHLP PDRDVLDGEQ 360
TSPSFMSTAW LVFKTFFASL LPEGPPAIAN 390 
Gene Ontology
 GO:0005789; C:endoplasmic reticulum membrane; IDA:UniProtKB.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0006987; P:activation of signaling protein activity involved in unfolded protein response; TAS:Reactome.
 GO:0006874; P:cellular calcium ion homeostasis; IEA:Compara.
 GO:0044267; P:cellular protein metabolic process; TAS:Reactome.
 GO:0043154; P:negative regulation of cysteine-type endopeptidase activity involved in apoptotic process; IEA:Compara.
 GO:0032092; P:positive regulation of protein binding; IEA:Compara.
 GO:0031396; P:regulation of protein ubiquitination; IEA:Compara.
 GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:Compara. 
Interpro
 IPR000626; Ubiquitin.
 IPR019955; Ubiquitin_supergroup. 
Pfam
 PF00240; ubiquitin 
SMART
 SM00213; UBQ 
PROSITE
 PS50053; UBIQUITIN_2 
PRINTS