CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004529
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Alpha-N-acetylgalactosaminidase 
Protein Synonyms/Alias
 Alpha-galactosidase B 
Gene Name
 NAGA 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
304LQNPLMIKINQDPLGubiquitination[1]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 Removes terminal alpha-N-acetylgalactosamine residues from glycolipids and glycopeptides. Required for the breakdown of glycolipids. 
Sequence Annotation
 REGION 78 79 Substrate binding.
 ACT_SITE 156 156 Nucleophile.
 ACT_SITE 217 217 Proton donor.
 BINDING 154 154 Substrate.
 BINDING 188 188 Substrate.
 BINDING 213 213 Substrate.
 BINDING 217 217 Substrate.
 MOD_RES 322 322 Phosphoserine.
 MOD_RES 332 332 Phosphoserine.
 CARBOHYD 124 124 N-linked (GlcNAc...).
 CARBOHYD 177 177 N-linked (GlcNAc...).
 CARBOHYD 201 201 N-linked (GlcNAc...).
 CARBOHYD 359 359 N-linked (GlcNAc...) (Potential).
 CARBOHYD 385 385 N-linked (GlcNAc...).
 DISULFID 38 80
 DISULFID 42 49
 DISULFID 127 158
 DISULFID 187 209  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; Disease mutation; Disulfide bond; Epilepsy; Glycoprotein; Glycosidase; Hydrolase; Lysosome; Phosphoprotein; Reference proteome; Signal. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 411 AA 
Protein Sequence
MLLKTVLLLG HVAQVLMLDN GLLQTPPMGW LAWERFRCNI NCDEDPKNCI SEQLFMEMAD 60
RMAQDGWRDM GYTYLNIDDC WIGGRDASGR LMPDPKRFPH GIPFLADYVH SLGLKLGIYA 120
DMGNFTCMGY PGTTLDKVVQ DAQTFAEWKV DMLKLDGCFS TPEERAQGYP KMAAALNATG 180
RPIAFSCSWP AYEGGLPPRV NYSLLADICN LWRNYDDIQD SWWSVLSILN WFVEHQDILQ 240
PVAGPGHWND PDMLLIGNFG LSLEQSRAQM ALWTVLAAPL LMSTDLRTIS AQNMDILQNP 300
LMIKINQDPL GIQGRRIHKE KSLIEVYMRP LSNKASALVF FSCRTDMPYR YHSSLGQLNF 360
TGSVIYEAQD VYSGDIISGL RDETNFTVII NPSGVVMWYL YPIKNLEMSQ Q 411 
Gene Ontology
 GO:0005737; C:cytoplasm; IBA:RefGenome.
 GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.
 GO:0004557; F:alpha-galactosidase activity; IBA:RefGenome.
 GO:0008456; F:alpha-N-acetylgalactosaminidase activity; IDA:UniProtKB.
 GO:0016052; P:carbohydrate catabolic process; IDA:UniProtKB.
 GO:0016139; P:glycoside catabolic process; IBA:RefGenome.
 GO:0046477; P:glycosylceramide catabolic process; IBA:RefGenome.
 GO:0009311; P:oligosaccharide metabolic process; IBA:RefGenome. 
Interpro
 IPR013785; Aldolase_TIM.
 IPR013780; Glyco_hydro_13_b.
 IPR002241; Glyco_hydro_27.
 IPR000111; Glyco_hydro_GHD.
 IPR017853; Glycoside_hydrolase_SF. 
Pfam
 PF02065; Melibiase 
SMART
  
PROSITE
 PS00512; ALPHA_GALACTOSIDASE 
PRINTS
 PR00740; GLHYDRLASE27.