CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011880
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 60S ribosomal protein L21-B 
Protein Synonyms/Alias
  
Gene Name
 RPL21B 
Gene Synonyms/Alias
 YPL079W; LPF6W 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
21MFQRDFRKHGAVHMSubiquitination[1]
32VHMSTYLKIYKVGDIubiquitination[1, 2]
35STYLKIYKVGDIVDIubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [2] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome; Ribonucleoprotein; Ribosomal protein. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 160 AA 
Protein Sequence
MGKSHGYRSR TRYMFQRDFR KHGAVHMSTY LKIYKVGDIV DIKANGSIQK GMPHKFYQGK 60
TGVVYNVTKS SVGVIINKMV GNRYLEKRLN LRVEHIKHSK CRQEFLERVK ANAAKRAEAK 120
AQGVAVQLKR QPAQPRESRI VSTEGNVPQT LAPVPYETFI 160 
Gene Ontology
 GO:0022625; C:cytosolic large ribosomal subunit; TAS:SGD.
 GO:0003735; F:structural constituent of ribosome; TAS:SGD.
 GO:0002181; P:cytoplasmic translation; TAS:SGD. 
Interpro
 IPR001147; Ribosomal_L21e.
 IPR018259; Ribosomal_L21e_CS.
 IPR008991; Translation_prot_SH3-like. 
Pfam
 PF01157; Ribosomal_L21e 
SMART
  
PROSITE
 PS01171; RIBOSOMAL_L21E 
PRINTS