CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012769
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Zinc finger SWIM domain-containing protein 7 
Protein Synonyms/Alias
 SWIM domain-containing and Srs2-interacting protein 1 homolog; SWIM-type zinc finger domain-containing protein 7 
Gene Name
 ZSWIM7 
Gene Synonyms/Alias
 SWS1 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
136TDILLMEKKQEA***ubiquitination[1]
137DILLMEKKQEA****ubiquitination[2]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Involved in early stages of the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents. 
Sequence Annotation
 ZN_FING 66 114 SWIM-type.  
Keyword
 Complete proteome; DNA damage; DNA recombination; DNA repair; Metal-binding; Nucleus; Reference proteome; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 140 AA 
Protein Sequence
MAVVLPAVVE ELLSEMAAAV QESARIPDEY LLSLKFLFGS SATQALDLVD RQSITLISSP 60
SGRRVYQVLG SSSKTYTCLA SCHYCSCPAF AFSVLRKSDS ILCKHLLAVY LSQVMRTCQQ 120
LSVSDKQLTD ILLMEKKQEA 140 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0097196; C:Shu complex; IDA:UniProtKB.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0000724; P:double-strand break repair via homologous recombination; IMP:UniProtKB.
 GO:0050821; P:protein stabilization; IMP:UniProtKB. 
Interpro
 IPR007527; Znf_SWIM. 
Pfam
 PF04434; SWIM 
SMART
  
PROSITE
 PS50966; ZF_SWIM 
PRINTS