CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003364
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Pyruvate dehydrogenase complex repressor 
Protein Synonyms/Alias
  
Gene Name
 pdhR 
Gene Synonyms/Alias
 aceC; genA; yacB; b0113; JW0109 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
213FEAIMAGKPEEAREAacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Transcriptional repressor for the pyruvate dehydrogenase complex genes aceEF and lpd. 
Sequence Annotation
 DOMAIN 9 77 HTH gntR-type.
 DNA_BIND 37 56 H-T-H motif (By similarity).  
Keyword
 Complete proteome; DNA-binding; Reference proteome; Repressor; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 254 AA 
Protein Sequence
MAYSKIRQPK LSDVIEQQLE FLILEGTLRP GEKLPPEREL AKQFDVSRPS LREAIQRLEA 60
KGLLLRRQGG GTFVQSSLWQ SFSDPLVELL SDHPESQYDL LETRHALEGI AAYYAALRST 120
DEDKERIREL HHAIELAQQS GDLDAESNAV LQYQIAVTEA AHNVVLLHLL RCMEPMLAQN 180
VRQNFELLYS RREMLPLVSS HRTRIFEAIM AGKPEEAREA SHRHLAFIEE ILLDRSREES 240
RRERSLRRLE QRKN 254 
Gene Ontology
 GO:0005622; C:intracellular; IEA:InterPro.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:EcoCyc.
 GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:EcoCyc.
 GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:EcoCyc.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR027376; FadR/GntR_C.
 IPR011711; GntR_C.
 IPR000524; Tscrpt_reg_HTH_GntR.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF07729; FCD
 PF00392; GntR 
SMART
 SM00895; FCD
 SM00345; HTH_GNTR 
PROSITE
 PS50949; HTH_GNTR 
PRINTS
 PR00035; HTHGNTR.